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RifSed_csp1_19ft_2_scaffold_6053

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_6053_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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45..1136
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UQ3_METBU rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cell division protein FtsZ rbh
RifSed_csp1_19ft_2_scaffold_6053_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1136..1864
DNA (729bp) protein (243aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DH68_9FIRM
7-carboxy-7-deazaguanine synthase-like
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_6053_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1861..2349)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSU9_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ71222.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_6053_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2403..3221
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXV8_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_6053_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3312..3818
DNA (507bp) protein (169aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_6053_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3830..4135)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5N3_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_6053_7
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4182..4538)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7P3_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ09611.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
RifSed_csp1_19ft_2_scaffold_6053_8
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4535..5197)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7P4_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ09612.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
RifSed_csp1_19ft_2_scaffold_6053_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(5333..6064)
DNA (732bp) protein (244aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_6053_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(6073..6939)
DNA (867bp) protein (289aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_6053_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6983..7480
DNA (498bp) protein (166aa)
Histidine triad (HIT) family protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NL28_DESTT
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:KCZ70400.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
histidine triad (HIT) family protein
RifSed_csp1_19ft_2_scaffold_6053_12
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(7482..8159)
DNA (678bp) protein (226aa)
Phosphoribosyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDC6_AMMDK
phosphoribosyltransferase
Tax=RBG_13_Nitrospirae_39_12_curated
RifSed_csp1_19ft_2_scaffold_6053_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8164..9522)
DNA (1359bp) protein (453aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nicotinate phosphoribosyltransferase id=2010408 bin=GWB2_CP_45_9 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
nicotinate phosphoribosyltransferase
RifSed_csp1_19ft_2_scaffold_6053_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9560..10027)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000367A6A8
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB {ECO:0000313|EMBL:KCZ72184.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdopterin-guanine dinucleotide biosynthesis protein B
RifSed_csp1_19ft_2_scaffold_6053_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10024..10578)
DNA (555bp) protein (185aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP59_METZD
Formate dehydrogenase family accessory protein FdhD {ECO:0000313|EMBL:KCZ72185.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formate dehydrogenase family accessory protein FdhD
Displaying 15 items

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