ggKbase home page

RifSed_csp1_19ft_2_scaffold_6864

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_6864_1

Not on your lists

comp(31..303)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JJ34_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38542.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_6864_2
unknown

Not on your lists

498..650
DNA (153bp) protein (51aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_6864_3

Not on your lists

753..1640
DNA (888bp) protein (296aa)
nuclease n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B46445 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37807.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
nuclease
RifSed_csp1_19ft_2_scaffold_6864_4
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1779..1949
DNA (171bp) protein (57aa)
id=4168195 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
RifSed_csp1_19ft_2_scaffold_6864_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2449..2742
DNA (294bp) protein (98aa)
Putative uncharacterized protein C4_0010 n=1 Tax=uncultured archaeon RepID=Q2Y4S3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72141.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PRC-barrel protein
RifSed_csp1_19ft_2_scaffold_6864_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2746..3501
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMC3_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72142.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_6864_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3566..4543
DNA (978bp) protein (326aa)
Phosphate transporter n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM5_METMS rbh
Phosphate/sulfate permease {ECO:0000313|EMBL:KCZ72143.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate transporter rbh
RifSed_csp1_19ft_2_scaffold_6864_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4526..5509)
DNA (984bp) protein (328aa)
Isopropylmalate/isohomocitrate dehydrogenase {ECO:0000313|EMBL:KCZ72144.1}; EC=1.1.1.- {ECO:0000313|EMBL:KCZ72144.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isopropylmalate/isohomocitrate dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRZ4_9EURY rbh
isopropylmalate/isohomocitrate dehydrogenase rbh
RifSed_csp1_19ft_2_scaffold_6864_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5511..6374)
DNA (864bp) protein (288aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ50_METMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_6864_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6371..6943)
DNA (573bp) protein (191aa)
Methanogen homoaconitase small subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPX4_METZD
3-isopropylmalate dehydratase small subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_6864_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6945..7439)
DNA (495bp) protein (165aa)
Predicted phosphoesterase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXA6_METKA
phosphoesterase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_6864_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7443..8498)
DNA (1056bp) protein (352aa)
Nitrate ABC transporter, ATP-binding protein, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72819.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrate ABC transporter ATP-binding protein
RifSed_csp1_19ft_2_scaffold_6864_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8733..9110
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72923.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_6864_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9165..9773
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72924.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 14 items

View Taxonomy