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RifSed_csp1_19ft_2_scaffold_9616

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_9616_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..526
DNA (525bp) protein (175aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNM4_METZD
RifSed_csp1_19ft_2_scaffold_9616_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(516..1199)
DNA (684bp) protein (228aa)
Hydrogenase accessory protein HypB n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9REP8_METVM
hydrogenase nickel incorporation protein HypB
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_9616_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1308..1787
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70304.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_9616_4
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1817..2560)
DNA (744bp) protein (248aa)
Membrane protein DUF81, putative id=4108710 bin=GWF2_Bacteroidetes_33_38 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
membrane protein
Tax=RBG_13_Bacteroidetes_42_15_curated
RifSed_csp1_19ft_2_scaffold_9616_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2884..3039)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73123.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_9616_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3094..3984)
DNA (891bp) protein (297aa)
Putative radical SAM superfamily n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7Y4_METCZ
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ73124.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM superfamily
RifSed_csp1_19ft_2_scaffold_9616_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4065..4220)
DNA (156bp) protein (52aa)
Rubredoxin n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IHJ8_THETR
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rubredoxin
RifSed_csp1_19ft_2_scaffold_9616_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4225..4569)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY92_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_9616_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5073..5501
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72591.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_9616_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5817..6698)
DNA (882bp) protein (294aa)
ubiA; 4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PB48_DEFDS
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_9616_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6742..7506
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1PQA8_9ZZZZ
Small G protein, GTPase SAR1 {ECO:0000313|EMBL:KCZ71653.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small G protein, GTPase SAR1
RifSed_csp1_19ft_2_scaffold_9616_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7509..8381)
DNA (873bp) protein (291aa)
Menaquinone biosynthesis decarboxylase, SCO4490 family n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KR98_ARCVS
menaquinone biosynthesis decarboxylase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 12 items

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