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RifSed_csp1_19ft_2_scaffold_4573

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_4573_1
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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104..2713
DNA (2610bp) protein (870aa)
TIGR02687 family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY20_METHD rbh
TIGR02687 family protein {ECO:0000313|EMBL:AGB49595.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
TIGR02687 family protein rbh
RifSed_csp1_19ft_2_scaffold_4573_2
unknown

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2763..2906
DNA (144bp) protein (48aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_3
unknown

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comp(2878..3003)
DNA (126bp) protein (42aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_4
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3099..4652
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS61_METAC rbh
Mobile element protein {ECO:0000313|EMBL:AKB23843.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
hypothetical protein rbh
RifSed_csp1_19ft_2_scaffold_4573_5
unknown

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4666..5091
DNA (426bp) protein (142aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_6
unknown

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5101..5235
DNA (135bp) protein (45aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_7
unknown

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5242..6261
DNA (1020bp) protein (340aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_8
unknown

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6278..7366
DNA (1089bp) protein (363aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_4573_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7373..9610
DNA (2238bp) protein (746aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_4573_trna_1
unknown

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comp(9854..9928)
DNA (75bp)
transferRNA Glu
RifSed_csp1_19ft_2_scaffold_4573_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10061..10528
DNA (468bp) protein (156aa)
UPI0003D1A54D related cluster n=1 Tax=unknown RepID=UPI0003D1A54D
Uncharacterized protein {ECO:0000313|EMBL:KCZ70689.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_4573_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10534..11040
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MHL9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ70690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_4573_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11499..12584
DNA (1086bp) protein (362aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KCZ72515.1}; EC=3.4.11.9 {ECO:0000313|EMBL:KCZ72515.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9) rbh
Xaa-Pro aminopeptidase n=2 Tax=Methanosarcina mazei RepID=M1Q3S5_METMZ rbh
RifSed_csp1_19ft_2_scaffold_4573_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12539..13456
DNA (918bp) protein (306aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01975}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methionine aminopeptidase (EC:3.4.11.18) rbh
Methionine aminopeptidase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAD1_METEZ rbh
RifSed_csp1_19ft_2_scaffold_4573_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13453..14229
DNA (777bp) protein (259aa)
UPI0003D1B00E related cluster n=1 Tax=unknown RepID=UPI0003D1B00E
Uncharacterized protein {ECO:0000313|EMBL:KCZ72513.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_4573_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14239..15255
DNA (1017bp) protein (339aa)
RNA cap guanine-N2 methyltransferase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6S8_METMS
RNA cap guanine-N2 methyltransferase {ECO:0000313|EMBL:KCZ72512.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA cap guanine-N2 methyltransferase
RifSed_csp1_19ft_2_scaffold_4573_16

Not on your lists

comp(15263..16171)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W925_UNCMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN03681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein rbh
RifSed_csp1_19ft_2_scaffold_4573_17

Not on your lists

comp(16194..17396)
DNA (1203bp) protein (401aa)
DNA/RNA helicase (EC:3.6.-.-)
SNF2-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THH4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKN03680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 18 items

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