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RifSed_csp1_19ft_2_scaffold_8267

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_8267_1
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(229..1470)
DNA (1242bp) protein (414aa)
Transposase, IS116/IS110/IS902 family n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW46_METCG
transposase, IS116/IS110/IS902 family
Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:AEB68476.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
RifSed_csp1_19ft_2_scaffold_8267_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1718..2296)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9U3_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_8267_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2414..2752)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0Q2_DEHLB
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ72261.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein P-II
RifSed_csp1_19ft_2_scaffold_8267_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2763..4064)
DNA (1302bp) protein (434aa)
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ammonium transport protein (Amt family) id=4828258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ammonium transporter
RifSed_csp1_19ft_2_scaffold_8267_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4226..5050
DNA (825bp) protein (275aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nifH; nitrogenase reductase (EC:1.18.6.1)
Dinitrogenase reductase NifH (Fragment) n=3 Tax=root RepID=D5I156_9ZZZZ
RifSed_csp1_19ft_2_scaffold_8267_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5055..5372
DNA (318bp) protein (106aa)
Nitrogen regulatory protein PII n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IKU1_THETR
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
RifSed_csp1_19ft_2_scaffold_8267_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5381..5758
DNA (378bp) protein (126aa)
Nitrogen regulatory protein PII n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJI2_DESOD
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
RifSed_csp1_19ft_2_scaffold_8267_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5774..7162
DNA (1389bp) protein (463aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Dinitrogenase alpha subunit n=1 Tax=uncultured microorganism RepID=D5I174_9ZZZZ rbh
nitrogenase component I subunit alpha rbh
RifSed_csp1_19ft_2_scaffold_8267_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7163..8482
DNA (1320bp) protein (440aa)
Nitrogenase molybdenum-iron protein {ECO:0000313|EMBL:KCZ73692.1}; EC=1.18.6.1 {ECO:0000313|EMBL:KCZ73692.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogenase (EC:1.18.6.1) rbh
Nitrogenase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D760_METSW rbh
RifSed_csp1_19ft_2_scaffold_8267_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8492..8767
DNA (276bp) protein (92aa)
Ferredoxin III, nif-specific n=1 Tax=Fischerella sp. JSC-11 RepID=G6FPB0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KCZ73691.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ferredoxin III
RifSed_csp1_19ft_2_scaffold_8267_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8811..9197
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCB2_9EURY
Putative signal-transduction protein {ECO:0000313|EMBL:KCZ73690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_8267_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9222..9932
DNA (711bp) protein (237aa)
Glutamine amidotransferase class-I n=1 Tax=Thermincola potens (strain JR) RepID=D5XDD1_THEPJ
GMP synthase family protein {ECO:0000313|EMBL:KCZ73688.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase
RifSed_csp1_19ft_2_scaffold_8267_13
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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9919..10623
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002DEFCF4
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIY14086.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
molybdenum ABC transporter periplasmic molybdate-binding protein
Displaying 13 items

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