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RifSed_csp1_19ft_2_scaffold_17708

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_17708_1
unknown

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comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_17708_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(154..1356)
DNA (1203bp) protein (401aa)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KCZ72571.1}; EC=4.1.2.43 {ECO:0000313|EMBL:KCZ72571.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME09_9EURY rbh
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator rbh
RifSed_csp1_19ft_2_scaffold_17708_3
unknown

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1418..1507
DNA (90bp) protein (30aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_17708_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1713..2249
DNA (537bp) protein (179aa)
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:KCZ70408.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KCZ70408.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A9B4 related cluster n=1 Tax=unknown RepID=UPI0003D1A9B4
ABC heme exporter, ATPase subunit
RifSed_csp1_19ft_2_scaffold_17708_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2246..2935
DNA (690bp) protein (230aa)
UPI0003D1C721 related cluster n=1 Tax=unknown RepID=UPI0003D1C721
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70409.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC heme exporter, inner membrane subunit B
RifSed_csp1_19ft_2_scaffold_17708_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2983..3672
DNA (690bp) protein (230aa)
UPI0003D1B57B related cluster n=1 Tax=unknown RepID=UPI0003D1B57B
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ccmC; heme exporter protein C
RifSed_csp1_19ft_2_scaffold_17708_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(3667..4251)
DNA (585bp) protein (195aa)
30S ribosomal protein S3Ae n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS3A_METTP
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S3Ae
RifSed_csp1_19ft_2_scaffold_17708_8
unknown

Not on your lists

comp(4816..5103)
DNA (288bp) protein (96aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_17708_9
unknown

Not on your lists

5281..6264
DNA (984bp) protein (328aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_17708_10
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

6380..6850
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003647103
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
RifSed_csp1_19ft_2_scaffold_17708_11
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

6854..7069
DNA (216bp) protein (72aa)
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
RifSed_csp1_19ft_2_scaffold_17708_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(7339..7929)
DNA (591bp) protein (197aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_17708_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(7949..8575)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W758_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 13 items

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