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RifSed_csp1_19ft_2_scaffold_7449

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_7449_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1..1968)
DNA (1968bp) protein (656aa)
Sodium/hydrogen exchanger n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWN3_9BACT rbh
potassium transporter KefB
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_7449_2
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(1978..2571)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3B1_METSW
hypothetical protein
Tax=CG_Omnitr_02
RifSed_csp1_19ft_2_scaffold_7449_3
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(2576..2860)
DNA (285bp) protein (95aa)
Restriction endonuclease S subunit {ECO:0000313|EMBL:AIG98711.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AIG98711.1};; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 8774.;"
Type I restriction-modification enzyme, S subunit n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28563_ARCFU
type I restriction-modification enzyme, S subunit
RifSed_csp1_19ft_2_scaffold_7449_4

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comp(2963..3199)
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S03H2_L00076 {ECO:0000313|EMBL:GAH27320.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Restriction modification system DNA specificity domain id=4836209 bin=GWC2_Methylomirabilis_70_16 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type i restriction modification DNA specificity domain
RifSed_csp1_19ft_2_scaffold_7449_5
unknown

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comp(3138..3446)
DNA (309bp) protein (103aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_7449_6
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(3573..3956)
DNA (384bp) protein (128aa)
Putative ribonuclease VapC id=3997324 bin=GWF2_Melainabacteria_37_15 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
twitching motility protein PilT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
RifSed_csp1_19ft_2_scaffold_7449_7
unknown

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comp(3928..4149)
DNA (222bp) protein (74aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_7449_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4623..4841)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BHE9_PETMO
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_7449_9

Not on your lists

comp(5251..5859)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THY4_METAC
Marine sediment metagenome DNA, contig: S01H4_C02522 {ECO:0000313|EMBL:GAG63314.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_7449_10
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(6239..6709)
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KHE93783.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein id=5043706 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
phage antirepressor protein
RifSed_csp1_19ft_2_scaffold_7449_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7255..8067
DNA (813bp) protein (271aa)
type i site-specific deoxyribonuclease (EC:3.1.21.3)
Type i site-specific deoxyribonuclease n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R216_METFO
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_7449_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8077..10002
DNA (1926bp) protein (642aa)
Type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6L9_METSW
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_7449_13
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10063..10440
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6M1_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17734.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
RifSed_csp1_19ft_2_scaffold_7449_14
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

10437..11405
DNA (969bp) protein (323aa)
Restriction endonuclease S subunit n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AZV0_9DELT
DNA methylase
Tax=AR13
Displaying 14 items

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