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RifSed_csp1_19ft_2_scaffold_30221

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_30221_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..116
DNA (114bp) protein (38aa)
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_30221_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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126..524
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7A2_METMS
30S ribosomal protein S9P
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_30221_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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528..713
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RPON_METTP
RifSed_csp1_19ft_2_scaffold_30221_trna_1
unknown

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717..791
DNA (75bp)
transferRNA Pro
RifSed_csp1_19ft_2_scaffold_30221_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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981..1127
DNA (147bp) protein (49aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_30221_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1129..1755
DNA (627bp) protein (209aa)
30S ribosomal protein S2 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLX6_METH6
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S2P
RifSed_csp1_19ft_2_scaffold_30221_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2456..3199
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS rbh
TIGR00161 family protein {ECO:0000313|EMBL:KCZ72069.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein rbh
RifSed_csp1_19ft_2_scaffold_30221_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3192..3593
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK6_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72070.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_30221_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3597..3953)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72071.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_30221_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3956..4186)
DNA (231bp) protein (77aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_30221_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4247..5728)
DNA (1482bp) protein (494aa)
Small ribosomal subunit Rsm22 (Methyltransferase) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7S3_METCZ rbh
Ribosomal methyltransferase Rsm22 {ECO:0000313|EMBL:KCZ72073.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small ribosomal subunit Rsm22 (methyltransferase) rbh
RifSed_csp1_19ft_2_scaffold_30221_11
unknown

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comp(5725..5964)
DNA (240bp) protein (80aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_30221_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7200..8000
DNA (801bp) protein (267aa)
RNA-directed DNA polymerase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MI28_9EURY
RNA-directed DNA polymerase
Tax=RBG_13_Bathyarchaeota_38_9_curated
RifSed_csp1_19ft_2_scaffold_30221_13
unknown

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comp(7945..8082)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 14 items

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