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RifSed_csp1_19ft_2_scaffold_5280

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_5280_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(126..872)
DNA (747bp) protein (249aa)
Putative PAS/PAC sensor protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5Z5_METSL
putative PAS/PAC sensor protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_5280_2

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comp(869..2674)
DNA (1806bp) protein (602aa)
Predicted signal transduction histidine kinase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Y7_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKM85796.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
signal transduction histidine kinase
RifSed_csp1_19ft_2_scaffold_5280_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2788..3594
DNA (807bp) protein (269aa)
Prephenate dehydratase {ECO:0000313|EMBL:KCZ71481.1}; EC=4.2.1.51 {ECO:0000313|EMBL:KCZ71481.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6W6_METEZ
RifSed_csp1_19ft_2_scaffold_5280_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3652..4299
DNA (648bp) protein (216aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; CTP:riboflavin 5'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01285}; Flavokinase {ECO:0000256|HAMAP-Rule:MF_01285}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CTP-dependent riboflavin kinase (EC:2.7.1.161)
CTP-dependent riboflavin kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKT7_METZD
RifSed_csp1_19ft_2_scaffold_5280_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4296..4994
DNA (699bp) protein (233aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAM9_METEZ
3,4-dihydroxy-2-butanone 4-phosphate synthase
RifSed_csp1_19ft_2_scaffold_5280_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5040..5414)
DNA (375bp) protein (125aa)
Transcriptional regulator, TrmB n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7K3_METTP
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71478.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator, TrmB
RifSed_csp1_19ft_2_scaffold_5280_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5711..6583
DNA (873bp) protein (291aa)
Branched-chain amino acid aminotransferase, group I {ECO:0000313|EMBL:KCZ71477.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KCZ71477.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched-chain amino acid aminotransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA45_METEZ rbh
RifSed_csp1_19ft_2_scaffold_5280_8
unknown

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7020..7199
DNA (180bp) protein (60aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_5280_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7238..7393
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72716.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_5280_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7515..8027)
DNA (513bp) protein (171aa)
Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Methanolobus tindarius RepID=NADM_METTI
cytidylyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_5280_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8029..9402)
DNA (1374bp) protein (458aa)
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN91_METZD
Coenzyme F420-reducing hydrogenase, beta subunit {ECO:0000313|EMBL:KCZ71525.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
RifSed_csp1_19ft_2_scaffold_5280_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9404..10384)
DNA (981bp) protein (327aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; Methylene-H(4)MPT reductase {ECO:0000256|HAMAP-Rule:MF_01091}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQS9_9EURY rbh
5,10-methylenetetrahydromethanopterin reductase rbh
RifSed_csp1_19ft_2_scaffold_5280_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10460..11083)
DNA (624bp) protein (208aa)
Putative uncharacterized protein C3_0022 n=1 Tax=uncultured archaeon RepID=Q2Y4F0_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_5280_14
unknown

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11143..11271
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

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