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RifSed_csp1_19ft_2_scaffold_5375

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_5375_1
unknown

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3..1211
DNA (1209bp) protein (403aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_5375_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1374..1811)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sulfolobus islandicus RepID=Q5W2Q5_SULIS
Transposase {ECO:0000313|EMBL:KCZ70366.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
IS200/IS605 family OrfA transposase
RifSed_csp1_19ft_2_scaffold_5375_3
unknown

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comp(1883..2137)
DNA (255bp) protein (85aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_5375_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2287..3804
DNA (1518bp) protein (506aa)
AMP phosphorylase (EC:2.4.2.4) rbh
AMP phosphorylase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XK77_METZD rbh
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_5375_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3806..4150)
DNA (345bp) protein (115aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_5375_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4187..5101)
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1BE6F related cluster n=1 Tax=unknown RepID=UPI0003D1BE6F
ribonuclease Z
RifSed_csp1_19ft_2_scaffold_5375_7
unknown

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comp(5135..5737)
DNA (603bp) protein (201aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_5375_trna_1
unknown

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comp(5791..5901)
DNA (111bp)
transferRNA Tyr
RifSed_csp1_19ft_2_scaffold_5375_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5950..7209)
DNA (1260bp) protein (420aa)
Nodulation efficiency protein NfeD n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8D2_METMS rbh
Membrane-bound serine protease (ClpP class) {ECO:0000313|EMBL:KCZ73196.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nodulation efficiency protein NfeD rbh
RifSed_csp1_19ft_2_scaffold_5375_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7206..7997)
DNA (792bp) protein (264aa)
SPFH domain, Band 7 family protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9X2_METTP rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:KCZ73197.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
band 7 protein rbh
RifSed_csp1_19ft_2_scaffold_5375_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8428..8706)
DNA (279bp) protein (93aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGN5_METFS
CRISPR-associated endonuclease Cas1
RifSed_csp1_19ft_2_scaffold_5375_11

Not on your lists

comp(8758..11124)
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1C6I1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CEG12565.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
RifSed_csp1_19ft_2_scaffold_5375_12
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11240..11698
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BHQ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09987.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
RifSed_csp1_19ft_2_scaffold_5375_13
unknown

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comp(11736..12395)
DNA (660bp) protein (220aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_5375_14
unknown

Not on your lists

comp(12403..12864)
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying 15 items

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