ggKbase home page

RifSed_csp1_19ft_2_scaffold_50571

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_50571_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2..559
DNA (558bp) protein (186aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNX2_METZD
RifSed_csp1_19ft_2_scaffold_50571_trna_1
unknown

Not on your lists

comp(594..678)
DNA (85bp)
transferRNA Ser
RifSed_csp1_19ft_2_scaffold_50571_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

784..1107
DNA (324bp) protein (108aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1116..1484
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYL7_METTM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1489..1863
DNA (375bp) protein (125aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1863..2099
DNA (237bp) protein (79aa)
SirA family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN3_METMS
SirA family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2096..2665)
DNA (570bp) protein (190aa)
UPF0215 protein MM_1007 n=2 Tax=Methanosarcina mazei RepID=Y1007_METMA
Hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2741..3445
DNA (705bp) protein (235aa)
Copper binding protein, plastocyanin/azurin family
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_50571_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3411..3569
DNA (159bp) protein (53aa)
Transcription regulator, AsnC-type n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KS89_ARCVS
Transcriptional regulator {ECO:0000313|EMBL:KCZ73570.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AsnC family transcriptional regulator
RifSed_csp1_19ft_2_scaffold_50571_9
unknown

Not on your lists

3593..3904
DNA (312bp) protein (104aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_50571_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3914..4681)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR5_METBU
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KCZ73569.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_50571_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4794..5975
DNA (1182bp) protein (394aa)
Bifunctional enzyme Fae/Hps n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=FAEHP_METTP rbh
Bifunctional enzyme Fae/Hps {ECO:0000256|HAMAP-Rule:MF_01268}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase rbh
RifSed_csp1_19ft_2_scaffold_50571_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6269..6580
DNA (312bp) protein (104aa)
Peptidase U32 n=1 Tax=Thermincola potens (strain JR) RepID=D5X7Z5_THEPJ
Collagenase-like protease {ECO:0000313|EMBL:KCZ72978.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase U32
Displaying 13 items

View Taxonomy