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RifSed_csp1_13ft_1_scaffold_2929

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_1_scaffold_2929_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1..153
DNA (153bp) protein (51aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_2929_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

272..853
DNA (582bp) protein (194aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000373A8AA
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_2929_3

Not on your lists

comp(1050..1418)
DNA (369bp) protein (123aa)
HxlR family transcriptional regulator Tax=mine drainage metagenome RepID=T1BGL7_9ZZZZ
HxlR family transcriptional regulator {ECO:0000313|EMBL:EQD67768.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RifSed_csp1_13ft_1_scaffold_2929_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1687..2712
DNA (1026bp) protein (342aa)
merA1; mercuric reductase (EC:1.16.1.1)
Mercuric reductase {ECO:0000313|EMBL:AFU58900.1}; EC=1.16.1.1 {ECO:0000313|EMBL:AFU58900.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Mercuric reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGG9_NITGG
RifSed_csp1_13ft_1_scaffold_2929_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2728..3096
DNA (369bp) protein (123aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
merA; mercuric reductase (EC:1.16.1.1)
mercuric reductase Tax=Desulfovibrio longus RepID=UPI0003B32E4F
RifSed_csp1_13ft_1_scaffold_2929_6
unknown

Not on your lists

comp(3342..3470)
DNA (129bp) protein (43aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_2929_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3528..6719)
DNA (3192bp) protein (1064aa)
putative molybdopterin oxidoreductase molybdopterin binding subunit; K08357 tetrathionate reductase subunit A bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative molybdopterin oxidoreductase molybdopterin binding subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_2929_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6716..7843)
DNA (1128bp) protein (376aa)
Polysulphide reductase NrfD Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEY5_ANADF
polysulfide reductase NrfD
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_2929_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7840..8691)
DNA (852bp) protein (284aa)
Molybdenum protein medium subunit Tax=Vibrio campbellii (strain ATCC BAA-1116 / BB120) RepID=A7MYH7_VIBCB
molybdenum protein medium subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_2929_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8833..9408
DNA (576bp) protein (192aa)
psmB3; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL55_NITGG
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_2929_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9408..10112
DNA (705bp) protein (235aa)
proteasome subunit alpha 1 (EC:3.4.25.1)
Proteasome, subunit alpha Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY1_NITGG
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_2929_12
unknown

Not on your lists

comp(10208..10690)
DNA (483bp) protein (161aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_2929_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10700..11773)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase (EC:2.4.1.227)
Glycosyltransferase 28 domain Tax=Thaumarchaeota archaeon N4 RepID=V6AQI2_9ARCH
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_2929_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11879..12943
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A36A4
DNA primase large subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_2929_15
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12897..13469)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003689C11
Phosphatidylglycerophosphate synthase
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:AGN27176.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
RifSed_csp1_13ft_1_scaffold_2929_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13508..14038)
DNA (531bp) protein (177aa)
adenylate kinase (EC:2.7.4.3)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B963D
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_2929_17
unknown

Not on your lists

14080..14751
DNA (672bp) protein (224aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_2929_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14767..15654)
DNA (888bp) protein (296aa)
Putative CcmB protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBR0_9ZZZZ
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_1_scaffold_2929_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15651..16589)
DNA (939bp) protein (313aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter-like protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_1_scaffold_2929_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(16670..18163)
DNA (1494bp) protein (498aa)
Carbohydrate binding family 6 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RQ51_METFO
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_2929_21
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

18287..19672
DNA (1386bp) protein (462aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
RifSed_csp1_13ft_1_scaffold_2929_22
unknown

Not on your lists

comp(19669..20436)
DNA (768bp) protein (256aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_2929_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20565..22862)
DNA (2298bp) protein (766aa)
Solute binding protein-like protein Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWH9_THEPD
solute binding protein-like protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 23 items

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