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RifSed_csp1_13ft_3_scaffold_557

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_3_scaffold_557_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_557_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(147..1124)
DNA (978bp) protein (326aa)
Molybdenum cofactor biosynthesis protein A, archaea Tax=mine drainage metagenome RepID=T0YWY9_9ZZZZ
GTP cyclohydrolase subunit moaa
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

1265..2155
DNA (891bp) protein (297aa)
ATPase associated with various cellular activities AAA_5 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3L9_SPHTD
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ACZ38836.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
RifSed_csp1_13ft_3_scaffold_557_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2152..3300
DNA (1149bp) protein (383aa)
hypothetical protein Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037F0792
VWA containing CoxE-like protein
VWA containing CoxE-like protein {ECO:0000313|EMBL:ABG03094.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
RifSed_csp1_13ft_3_scaffold_557_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3391..4266
DNA (876bp) protein (292aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
Molybdopterin dehydrogenase FAD-binding Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ75_9CHLR
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFH85723.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
RifSed_csp1_13ft_3_scaffold_557_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

4268..4795
DNA (528bp) protein (176aa)
(2Fe-2S)-binding domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P8_SPHTD
(2Fe-2S)-binding domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
RifSed_csp1_13ft_3_scaffold_557_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4792..6183
DNA (1392bp) protein (464aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS3_RHOM4
carbon-monoxide dehydrogenase, large subunit
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY49636.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
RifSed_csp1_13ft_3_scaffold_557_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6140..7009
DNA (870bp) protein (290aa)
carbon-monoxide dehydrogenase large subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, large subunit Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF1_RHOMR
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY49636.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
RifSed_csp1_13ft_3_scaffold_557_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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7033..7473
DNA (441bp) protein (147aa)
carbon monoxide dehydrogenase subunit G; K09386 hypothetical protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
carbon monoxide dehydrogenase subunit G
Tax=RBG_16_RIF_CHLX_72_14_curated
RifSed_csp1_13ft_3_scaffold_557_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(7479..8141)
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P6_SPHTD
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
RifSed_csp1_13ft_3_scaffold_557_11
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8152..8982)
DNA (831bp) protein (277aa)
MobA-related glycosyltransferase, putative Tax=Geobacter metallireducens RepID=Q39TQ5_GEOMG
Conserved protein of unknown function[Include probable molybdopterin binding domain]
Uncharacterized protein {ECO:0000313|EMBL:CCQ75117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
RifSed_csp1_13ft_3_scaffold_557_12
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9119..10132)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003750495
Uncharacterized protein {ECO:0000313|EMBL:EQB64481.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
XshC-Cox1-family protein
RifSed_csp1_13ft_3_scaffold_557_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10249..10743
DNA (495bp) protein (165aa)
Single-stranded DNA-binding protein (Fragment) Tax=mine drainage metagenome RepID=T0ZIN9_9ZZZZ
OB-fold nucleic acid binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10840..11115)
DNA (276bp) protein (92aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11245..11589)
DNA (345bp) protein (115aa)
Rieske (2Fe-2S) domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UR79_ROSS1
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11614..12879)
DNA (1266bp) protein (422aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M16 domain-containing protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_557_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12876..14090)
DNA (1215bp) protein (405aa)
Peptidase M16 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8J3_CALAS
peptidase M16 family protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14404..15045
DNA (642bp) protein (214aa)
Beta-lactamase domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFG8_METPE
glyoxalase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_557_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15056..15484)
DNA (429bp) protein (143aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_557_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15489..16658)
DNA (1170bp) protein (390aa)
Band 7 protein Tax=mine drainage metagenome RepID=T1AE37_9ZZZZ
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_557_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16658..17044)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z287_METPS
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_557_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17282..18265)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon I-plasma RepID=T0LME7_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_557_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18436..19281)
DNA (846bp) protein (282aa)
Short chain dehydrogenase Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X7Y6_9NOCA
putative oxidoreductase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_557_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19394..20461)
DNA (1068bp) protein (356aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_557_25
unknown

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comp(20660..20878)
DNA (219bp) protein (73aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_557_26
RBG_16_Archaea_50_20_curated, Archaea

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21016..21480
DNA (465bp) protein (155aa)
ATP-dependent helicase Tax=uncultured archaeon GZfos34H10 RepID=Q649R1_9ARCH
ATP-dependent helicase
Tax=RBG_16_Archaea_50_20_curated
Displaying 26 items

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