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RifSed_csp1_19ft_3_scaffold_1288

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_3_scaffold_1288_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..650)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003726D78
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(796..1098)
DNA (303bp) protein (101aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000368E3B2
F420H2 dehydrogenase subunit K
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1095..1334)
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1331..1648)
DNA (318bp) protein (106aa)
NADH dehydrogenase subunit J Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J654_DESRM
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1662..2948)
DNA (1287bp) protein (429aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C97F7
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2945..4033)
DNA (1089bp) protein (363aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000369358F
NADH dehydrogenase I subunit D
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_1288_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4035..4526)
DNA (492bp) protein (164aa)
NADH dehydrogenase subunit C (EC:1.6.99.5)
NADH dehydrogenase subunit C Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8C6_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4557..4952)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000376CD1C
NADH:ubiquinone oxidoreductase subunit 3 (chain A)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5104..5670
DNA (567bp) protein (189aa)
Oxidoreductase molybdopterin binding Tax=Pedosphaera parvula Ellin514 RepID=B9XEB2_9BACT
oxidoreductase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5701..6570
DNA (870bp) protein (290aa)
Sec-independent protein translocase protein TatC Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKB4_NITGG
tatC; TatC subunit of twin-arginine targeting system
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6604..7032
DNA (429bp) protein (143aa)
Sec-independent protein translocase TatA Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RUY7_PYRIL
twin arginine-targeting protein translocase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7122..8636
DNA (1515bp) protein (505aa)
FAD/FMN-containing dehydrogenase Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8N6_9EURY
FAD/FMN-containing dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8636..10066
DNA (1431bp) protein (477aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10063..10578)
DNA (516bp) protein (172aa)
Transcriptional regulator, AsnC family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBV5_ACIB4
transcriptional regulator
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_1288_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10714..11040)
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_1288_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(11042..11569)
DNA (528bp) protein (176aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_1288_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11569..12525)
DNA (957bp) protein (319aa)
Putative uncharacterized protein Tax=uncultured organism MedDCM-OCT-S04-C1 RepID=D6PJP4_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_1288_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12522..13811)
DNA (1290bp) protein (430aa)
petD; menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit (EC:1.10.2.-)
Cytochrome bc1 complex cytochrome b/c subunit Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LGP1_HALWC
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_1288_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13821..14588)
DNA (768bp) protein (256aa)
Cytochrome b subunit of the bc complex Tax=uncultured organism MedDCM-OCT-S04-C1 RepID=D6PJP5_9ZZZZ
cytochrome bc1 complex cytochrome b subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_1288_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14601..15404)
DNA (804bp) protein (268aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15409..15729)
DNA (321bp) protein (107aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15726..16331)
DNA (606bp) protein (202aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16619..16945
DNA (327bp) protein (109aa)
atpG; vacuolar (H+)-ATPase G subunit (EC:3.6.3.14)
ATP synthase H subunit Tax=Halococcus morrhuae DSM 1307 RepID=M0MSX4_HALMO
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16938..18902
DNA (1965bp) protein (655aa)
atpI; V-type ATP synthase subunit I (EC:3.6.3.14)
A(1)A(0)-type ATP synthase, subunit I Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W368_UNCMA
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18907..19137
DNA (231bp) protein (77aa)
V-type ATP synthase subunit K (EC:3.6.3.14)
H(+)-transporting ATP synthase, subunit C Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIJ5_METAC
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19169..19726
DNA (558bp) protein (186aa)
V-type ATP synthase subunit E Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=VATE_METLZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19711..20820
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003825A79
A-type ATP synthase subunit C
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20822..21118
DNA (297bp) protein (99aa)
V-type ATP synthase subunit F Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=VATF_METPE
V-type ATP synthase subunit F
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_1288_29
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

21147..22160
DNA (1014bp) protein (338aa)
ATP synthase subunit alpha (EC:3.6.3.14)
V-type ATP synthase alpha chain Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REZ8_ARCPA
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 29 items

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