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RifSed_csp1_19ft_4_scaffold_5964

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_4_scaffold_5964_1
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2..295)
DNA (294bp) protein (98aa)
Binding-protein-dependent transport systems inner membrane component Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B003_HERA2
putative polyamine ABC transporter, permease protein
Tax=RBG_16_Actinobacteria_67_15_curated
RifSed_csp1_19ft_4_scaffold_5964_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(549..2006)
DNA (1458bp) protein (486aa)
Glutamate-1-semialdehyde aminotransferase Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3Q8_KORCO
glutamate-1-semialdehyde aminotransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_5964_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2023..3513
DNA (1491bp) protein (497aa)
Methylmalonate-semialdehyde dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SFK4_9BACT
methylmalonate-semialdehyde dehydrogenase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_5964_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3588..5087
DNA (1500bp) protein (500aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI000365F297
aldehyde dehydrogenase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_4_scaffold_5964_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5175..5552
DNA (378bp) protein (126aa)
source missing description 7..119 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_4_scaffold_5964_trna_1
unknown

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comp(5641..5736)
DNA (96bp)
transferRNA Thr
RifSed_csp1_19ft_4_scaffold_5964_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5816..6694
DNA (879bp) protein (293aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_5964_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6789..7712
DNA (924bp) protein (308aa)
Cation efflux family protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cation diffusion facilitator family transporter
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_4_scaffold_5964_8
unknown

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comp(7614..7823)
DNA (210bp) protein (70aa)

This feature has no annotations

RifSed_csp1_19ft_4_scaffold_5964_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7961..9436
DNA (1476bp) protein (492aa)
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P7R5_9ARCH
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_4_scaffold_5964_10
RBG_13_OP11_40_7_curated, Microgenomates, Bacteria

Not on your lists

comp(9503..10045)
DNA (543bp) protein (181aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
inositol monophosphatase
Tax=RBG_13_OP11_40_7_curated
Displaying 11 items

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