ggKbase home page

RifSed_csp2_19ft_3_scaffold_10936

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_10936_1
unknown

Not on your lists

331..909
DNA (579bp) protein (193aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_10936_2
unknown

Not on your lists

906..1451
DNA (546bp) protein (182aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_10936_3
unknown

Not on your lists

1444..1974
DNA (531bp) protein (177aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_10936_4
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

1996..2550
DNA (555bp) protein (185aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKQ16464.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_839.;"
NUDIX hydrolase id=17281 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
NUDIX hydrolase
RifSed_csp2_19ft_3_scaffold_10936_5
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

2547..3269
DNA (723bp) protein (241aa)
putative DNA alkylation repair enzyme
Putative uncharacterized protein id=3695400 bin=GWF2_Planctomycete_41_51 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211 rbh
Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
RifSed_csp2_19ft_3_scaffold_10936_6
RHI_OP11_Roizmanbacteria_37_23, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3329..4411
DNA (1083bp) protein (361aa)
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 id=5094008 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
GTP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_37_23_curated
RifSed_csp2_19ft_3_scaffold_10936_7
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4491..4763
DNA (273bp) protein (91aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:452 RepID=R6Z8T3_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
30S ribosomal protein S6
RifSed_csp2_19ft_3_scaffold_10936_8
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

4929..5441
DNA (513bp) protein (171aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=41182 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_OP11_39_9b_curated
RifSed_csp2_19ft_3_scaffold_10936_9
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

5737..6369
DNA (633bp) protein (211aa)
hypothetical protein id=35624 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
RifSed_csp2_19ft_3_scaffold_10936_10
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6362..6871
DNA (510bp) protein (170aa)
Uncharacterized protein id=2837912 bin=GWF2_CPR3_35_18 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
RifSed_csp2_19ft_3_scaffold_10936_11
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

6868..7386
DNA (519bp) protein (173aa)
hypothetical protein id=35645 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
RifSed_csp2_19ft_3_scaffold_10936_12
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7388..8509
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZJ7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
RifSed_csp2_19ft_3_scaffold_10936_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


8506..8913
DNA (408bp) protein (136aa)
50S ribosomal protein L9 n=1 Tax=Aquifex aeolicus (strain VF5) RepID=RL9_AQUAE
rplI; 50S ribosomal protein L9
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RifSed_csp2_19ft_3_scaffold_10936_14
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

8945..10081
DNA (1137bp) protein (379aa)
2-alkenal reductase id=5084939 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Trypsin
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
RifSed_csp2_19ft_3_scaffold_10936_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10078..10614)
DNA (537bp) protein (179aa)
Tax=RBG_16_Chloroflexi_57_8_curated
RifSed_csp2_19ft_3_scaffold_10936_16
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(10611..11642)
DNA (1032bp) protein (344aa)
Peptide chain release factor 1 n=1 Tax=Aquifex aeolicus (strain VF5) RepID=RF1_AQUAE
prfA; peptide chain release factor 1
Peptide chain release factor 1; Short=RF-1;; TaxID=224324 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
RifSed_csp2_19ft_3_scaffold_10936_17
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists


comp(11668..11985)
DNA (318bp) protein (106aa)
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=15191253 bin=GWC1_OP11_49_16_COMPLETE species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rpmE; 50S ribosomal protein L31
Tax=RBG_19FT_COMBO_OP11_43_10_curated
RifSed_csp2_19ft_3_scaffold_10936_18
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12028..12264)
DNA (237bp) protein (79aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2ATP8_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
Displaying 18 items

View Taxonomy