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RifSed_csp2_19ft_3_scaffold_6105

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_6105_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2..505
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7F2_9BACT
ABC-2 transporter family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

502..1296
DNA (795bp) protein (265aa)
protein of unknown function DUF990; K01992 ABC-2 type transport system permease protein id=85479 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1296..1568
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EG86_9BACT
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1549..1791
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E3V5_9BACT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1851..2810
DNA (960bp) protein (320aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium RepID=K2AKF2_9BACT rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2814..3599
DNA (786bp) protein (262aa)
protein of unknown function UPF0118 id=75074 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3767..4003
DNA (237bp) protein (79aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3907..4857)
DNA (951bp) protein (317aa)
type 11 SAM-dependent methyltransferase id=22810 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
type 11 SAM-dependent methyltransferase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4827..5528)
DNA (702bp) protein (234aa)
glycosyl transferase family protein id=22809 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
glycosyl transferase family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5535..6713)
DNA (1179bp) protein (393aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DPG1_9BACT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6915..7382
DNA (468bp) protein (156aa)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured bacterium RepID=K2EVC8_9BACT
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7382..7987
DNA (606bp) protein (202aa)
transmembrane_regions 7..26 id=91920 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7984..8589)
DNA (606bp) protein (202aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=uncultured bacterium RepID=K2ET56_9BACT
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(8660..8797)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG67_9EURY id=85879 bin=ACD57 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(8804..9073)
DNA (270bp) protein (90aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9149..9616
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FRE5_9BACT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9597..10724
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ET16_9BACT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10762..11346
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH id=85466 bin=ACD57 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Transcriptional regulator
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11367..12623
DNA (1257bp) protein (419aa)
Protein-export membrane protein SecD n=2 Tax=Selenomonas RepID=D4S7Z7_9FIRM id=85468 bin=ACD57 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
protein-export membrane protein SecD
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

12627..13502
DNA (876bp) protein (292aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF id=85467 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Protein translocase subunit SecF
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(13488..14831)
DNA (1344bp) protein (448aa)
polyA polymerase family protein; K00970 poly(A) polymerase [EC:2.7.7.19] id=85465 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
polyA polymerase family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

14850..16520
DNA (1671bp) protein (557aa)
gmc:GY4MC1_0988 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=6647 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(16762..17817)
DNA (1056bp) protein (352aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17821..18630)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000368A080
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18634..19632)
DNA (999bp) protein (333aa)
Putative MccF-like protein (Microcin C7 resistance) id=2739747 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
peptidase U61 LD-carboxypeptidase A
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19639..20295)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8JFQ0_BACCE
putative methyltransferase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(20307..20687)
DNA (381bp) protein (127aa)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADA9_NITEC
S-adenosylmethionine decarboxylase-related protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6105_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(20693..21298)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD196 RepID=R8G9X0_BACCE
tRNA synthetases class II family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 28 items

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