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RifSed_csp2_16ft_3_scaffold_31221

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_31221_1

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3..347
DNA (345bp) protein (115aa)
Ankyrin repeat Tax=Pandoravirus salinus RepID=S4W2K0_9VIRU
Ankyrin repeat {ECO:0000313|EMBL:AGO84420.1}; species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Pandoravirus salinus.;"
RifSed_csp2_16ft_3_scaffold_31221_2
unknown

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comp(577..1350)
DNA (774bp) protein (258aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_31221_3
Acinetobacter gerneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1350..1829)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Acinetobacter gerneri RepID=N8Y6S8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV32467.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gerneri DSM 14967 = CIP 107464.;"
RifSed_csp2_16ft_3_scaffold_31221_4
unknown

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comp(2097..2936)
DNA (840bp) protein (280aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_31221_5
unknown

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comp(3053..3454)
DNA (402bp) protein (134aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_31221_6
Perkinsus marinus, Perkinsus, Perkinsida, Eukaryota

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comp(3393..3863)
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) RepID=C5KCY0_PERM5
Putative uncharacterized protein {ECO:0000313|EMBL:EER17729.1}; species="Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus.;" source="Perkinsus marinus (strain ATCC 50983 / TXsc).;"
peptidase C1A papain
RifSed_csp2_16ft_3_scaffold_31221_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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3914..4351
DNA (438bp) protein (146aa)
id=3144751 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
RifSed_csp2_16ft_3_scaffold_31221_8
unknown

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4894..5256
DNA (363bp) protein (121aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_31221_9
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5290..7200)
DNA (1911bp) protein (637aa)
hypothetical protein Tax=Psychroflexus tropicus RepID=UPI00035F2B17
protein with phosphorylated CTD interacting factor 1 WW domain
Protein with phosphorylated CTD interacting factor 1 WW domain {ECO:0000313|EMBL:AFU67530.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
RifSed_csp2_16ft_3_scaffold_31221_10
unknown

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7279..7452
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_31221_11

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comp(7645..8049)
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL94147.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RifSed_csp2_16ft_3_scaffold_31221_12
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

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comp(8294..8872)
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=Cricetulus griseus RepID=G3HGQ2_CRIGR
Putative uncharacterized protein {ECO:0000313|EMBL:EGW05740.1}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;"
Signal recognition particle receptor protein FtsY
RifSed_csp2_16ft_3_scaffold_31221_13
unknown

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8927..9244
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 13 items

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