ggKbase home page
Advanced Search
Search Help

66_006_scaffold_244_5

Organism: 66_006_Clostridium__paraputrificum_30_389

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3590..7120)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 999.99
  • Bit_score: 2099
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 999.99
  • Bit_score: 2060
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 999.99
  • Bit_score: 2092
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3531
TTGTTTGAGTTAAATAATTTTGATGCAATACAAATAGGATTAGCATCTCCTGAGCAAGTAAGAAAATGGTCAAGAGGAGAAGTTAAGAAACCAGAAACAATAAACTATAGAACATTAAAGCCTGAAAGAGATGGTCTATTCTGTGAAAGAATATTTGGACCAATGAAGGATTGGGAATGTCACTGTGGTAAATATAAAAGAGTAAGATATAAAGGTATAGTTTGTGATAGATGTGGAGTTGAAGTCACAAAGGCTAAAGTTAGAAGAGAGAGAATGGGGCATATAGAACTGGCTGCCCCAGTATCTCATATATGGTACTTCAAAGGAATTCCATCAAGAATGGGATTAATACTTGATATGTCACCAAGAGCTTTAGAAAAAATACTATACTTTGCTTCATACGTAGTAATTGATCCTAAGGAAACACCACTTTTAAAGAAGCAACTTCTTAATGAAAAAGAATATAGAGAAGCTGCAGATAAATATGGTGAAGAAAGCTTTGTTGCAGGTATGGGTGCAGAAGCTGTTAAACAACTTCTAGGAGAAATAGATTTAGAAGCACAATCTATAGAGTTAAAAGAAGAGTTAAAGCAAAGTACAGGTCAAAAAAAGGTAAGAATAATTAGAAGACTTGAAGTTATTGAATCCTTCAAAAAGTCTGGTAATGATCCAAAGTGGATGATTATAGATGTAATTCCTGTTATTCCACCAGATTTAAGACCAATGGTACAATTAGATGGTGGAAGATTTGCAACATCTGATTTAAATGATCTTTACAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGATTTAGGAGCTCCTGATATCATTGTTAGAAATGAAAAAAGAATGCTTCAAGAAGCAGTAGATGCTCTTGTAGATAATGGAAGAAGAGGAAGAGCTGTAACAGGTCCTGGTAATAGACCATTAAAGTCTTTATCAGATATGCTTAAAGGTAAGCAAGGTAGATTTAGACAAAACTTACTTGGTAAGAGAGTTGACTACTCAGGTAGATCTGTTATCGTTGTTGGTCCAGAATTAAAAATGTACCAATGTGGTCTTCCTAAAGAAATGGCTCTTGAATTATTCAAGCCATTTGTAATGAAAAAATTAGTTGAAGATGGAATAGCTCATAACATAAAGAGTGCTAAGAGAATGGTAGAGAGAGTAATGCCACAAGTATGGGATGTATTAGAAGAAGTTATTGCAGACCATCCGGTATTATTAAACCGTGCTCCTACACTTCACAGATTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAGTTACATCCATTAGTTTGTACAGCATATAATGCTGACTTTGATGGTGACCAAATGGCTGTTCACGTACCTTTATCTGTAGAAGCACAAGCAGAAGCAAGATTTTTAATGCTTGCGGCTGGTAACATATTAAAGCCATCTGATGGTAAACCAGTTTGTGTTCCTACTCAAGATATGGTTCTTGGTTCTTATTATTTAACAATAGATAAGGAACAAGAAAAGGAAGATAAATATTTCTACTCAAAAGAAGAAGCTATAATGGCTTATGAGTTAAAAGAAATAGGAGTACATGATAAAATACATGTAAAGTTATTTAAGACTGTAGATGGAGTTGAAAAAACAGGAATAATTAAAACTACTGTTGGTAAATTAATATTCAATGAATCAATTCCACAAGATCTTGGATTTGTTGATAGAAATAATAAAGATGAAGAGTTTAACTTAGAAGTAGACTTCTTAGTTACTAAGAAATCTTTAGGTAAGATAATAGATAAGTGTTACTTAAAGCATGGTCCAACTGAAACTTCGATAATGTTGGATAAAATAAAAGCCTTAGGATATCACTATTCGTCAATCGGAGCTATAACTGTTGCTGCATCAGATATGATTGTACCTAAAGAAAAGTATGATTTATTAAGAGATGCGGATGAAACAATAGAAAAGATTGAAAAAATGTATAAAAGAGGTTTCATATCTGATGATGAAAGATATGAAAGAGTTATAGAAAAATGGACTAAGACAACTGAAGAAGTTGCTGATACTCTAATGGAAAGCCTTGATAAATTTAACCCAATATTTATGATGGCTGACTCTGGTGCCAGAGGTTCTAAGTCACAAATTAAGCAATTAGCTGGTATGAGAGGACTTATGGCAAGTCCATCTGGTAAGATTATAGAATTACCAATTAGAGCATCCTTTAGAGAAGGTCTAGATGTACTTGAATACTTCTTATCTACTCACGGAGCTAGAAAAGGTAATGCCGATACCGCCTTAAAGACTGCCGATTCAGGATACTTAACTAGAAGATTAGTTGATGTTTCTCAAGACGTAATTGTAAGAGAAGAAGACTGTGGCGCTACAGATGGTATGGTTGTATCTGAAATTAGAGAAGGTAATGAAGTTGTTGAAGGCTTAGCTGAAAGATTAACAGGTAGATATCTTGCAGAAGATGTAATAAACCCTTCTACAGGAGAAGTTATTGCTAATAACGATACTTATGTTGATTCAGAAATGGCAGAAACAATAGTAGCCACAGGAGTTAAAAAGGTTAAAATTAGATCTGTATTTACATGTAAGTGTAAAATAGGTGTATGTGCTAAGTGTTATGGAATGAATATGGCTACTGCTAAGAAGATAAACATAGGTGAAGCAGTTGGTATAATAGCTGCTCAATCTATCGGTGAACCAGGAACTCAGCTTACAATGAGAACATTCCATACAGGTGGTGTTGCCGGTGCGGATATAACACAAGGTCTTCCTAGAGTTGAAGAATTATTTGAAGCTAGAAAACCTAAGGGGCTTGCAATTGTAAGTGAAATTAGTGGTACTGTAAGAATAGAGGAAACTAAGAAAAAGAGAACTGTATATGTAATGGGAGCTGATGGCGAAGAAAAGAGCTATGATATTCCATTTGGATCAAGACTAAAAGTTAACGATAATGATGTTATAGAAGCTGGAGATGAAGTTACAGAAGGTTCTGTTAACCCACATGATATCATGAATATCAAGGGTATAGATGGTGCTAGAAGATATCTGCTTAGTGAAGTTCAAAAAGTTTATAGACTTCAAGGGGTTGATATTAATGATAAGCACTTAGAAGTAGTTGTTAGACAAATGACTAGAAAGATTAAAGTTACAGATTCTGGTGATACTGAACTATTACCTGGAACAATGATTGATATATTTGACTTCGAAGAAGCAAATGAAAAGGTAAGAGAGTTTGGTGGAGAAGAAGCTACAGGAGAACAAGCGCTATTAGGAATTACTAAAGCTGCTCTTGCAACTGACAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTACTTACAGAAGCTGCAATAAAGGGTAAAACTGATCCTCTTGTTGGATTGAAGGAAAATGTAATAATAGGTAAGCTGATTCCAGCTGGAACTGGTATGATGAGATACAGATCAGTAAAGCTTGATGTTGAAGAAGATTTAACTATGGATGACAGCTTATTAAAGGTAGAATAA
PROTEIN sequence
Length: 1177
LFELNNFDAIQIGLASPEQVRKWSRGEVKKPETINYRTLKPERDGLFCERIFGPMKDWECHCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKILYFASYVVIDPKETPLLKKQLLNEKEYREAADKYGEESFVAGMGAEAVKQLLGEIDLEAQSIELKEELKQSTGQKKVRIIRRLEVIESFKKSGNDPKWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALVDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGIAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNILKPSDGKPVCVPTQDMVLGSYYLTIDKEQEKEDKYFYSKEEAIMAYELKEIGVHDKIHVKLFKTVDGVEKTGIIKTTVGKLIFNESIPQDLGFVDRNNKDEEFNLEVDFLVTKKSLGKIIDKCYLKHGPTETSIMLDKIKALGYHYSSIGAITVAASDMIVPKEKYDLLRDADETIEKIEKMYKRGFISDDERYERVIEKWTKTTEEVADTLMESLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPSGKIIELPIRASFREGLDVLEYFLSTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREEDCGATDGMVVSEIREGNEVVEGLAERLTGRYLAEDVINPSTGEVIANNDTYVDSEMAETIVATGVKKVKIRSVFTCKCKIGVCAKCYGMNMATAKKINIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEISGTVRIEETKKKRTVYVMGADGEEKSYDIPFGSRLKVNDNDVIEAGDEVTEGSVNPHDIMNIKGIDGARRYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTDSGDTELLPGTMIDIFDFEEANEKVREFGGEEATGEQALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKTDPLVGLKENVIIGKLIPAGTGMMRYRSVKLDVEEDLTMDDSLLKVE*