ggKbase home page

66_006_scaffold_244

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_244_1
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDP9_9RHOB
translation elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
66_006_scaffold_244_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(257..2323)
DNA (2067bp) protein (689aa)
Elongation factor G n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGY0_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
fusA1; elongation factor G
66_006_scaffold_244_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2400..2906)
DNA (507bp) protein (169aa)
30S ribosomal protein S7 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH21_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsG; 30S ribosomal protein S7
66_006_scaffold_244_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3018..3395)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Clostridium RepID=RS12_CLOB8
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
66_006_scaffold_244_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3590..7120)
DNA (3531bp) protein (1177aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT
66_006_scaffold_244_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7142..10846)
DNA (3705bp) protein (1235aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUU2_9CLOT
66_006_scaffold_244_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11118..11483)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQD2_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
66_006_scaffold_244_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11526..12029)
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=2 Tax=Clostridium botulinum B RepID=B2TIG6_CLOBB
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
66_006_scaffold_244_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12242..12931)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPD5_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rplA; 50S ribosomal protein L1
66_006_scaffold_244_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12984..13409)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F310_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
66_006_scaffold_244_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13498..14040)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGX0_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nusG; transcription antitermination protein NusG
66_006_scaffold_244_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14052..14279)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q1_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
preprotein translocase, SecE subunit
66_006_scaffold_244_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14673..14768)
DNA (96bp) protein (32aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1N2_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying 13 items

View Taxonomy