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66_006_scaffold_244_6

Organism: 66_006_Clostridium__paraputrificum_30_389

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(7142..10846)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 999.99
  • Bit_score: 2244
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 999.99
  • Bit_score: 2209
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUU2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 999.99
  • Bit_score: 2244
  • Evalue 0.0

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3705
ATGGTACATCCTGTCCAAGTTGGGAAAAGAACAAGAATGAGTTTTGGTAAGGTTAAAGACGTAACCGAAATGCCAAATCTAATTGAAGTACAATTAGATTCGTATCAGTGGTTTTTAAGAGAAGGGCTTCATGAGGTTTTTGATGATGTCAATCCGATAAGCAACTTTACTGGTAATCTAGTACTTGAATTCGTAGACTATAAGCTTGATATGGATAATATTAAGTATTCAGTGGAAGAGTGTAAGGAAAGAGACGCTACTTATGCTGCACCACTAAAGGTTTCTGTAAGATTACAGAACAATGAAACAGGAGAAATAAAAGAACAAGAAGTCTTCATGGGTGATTTCCCATTAATGACTGAACAAGGAACTTTTATTATTAATGGTGCTGAAAGAGTAATAGTCAGCCAATTAGTAAGATCTCCAGGTGTATATTACAGTTATAGTAGAGATAAGAGTGGTAAAAAGCTGTTTTCTTCTACAGTAATTCCAAACAGAGGAGCTTGGTTAGAATATGAAACTGACTCTAATGACGTAATATATGTAAGAATTGATAAGACTAGAAAGCTACCAATCACTATTTTAGGAAGAGCAATGGGATTTGGAAGTGATCAAGAATTATTAGATTACTTTGGAGAAGAAGAAAGATTCAAGGCAACAATTGAAAAAGACAATACTAAAACGAAAGAAGAAGCACTATTAGAAATCTATAAAAGATTAAGACCAGGTGAACCACCTACAGTAGATAGTGCAGTATCTTTAATTGATTCTTTATTCTTTGATGCAAAAAGATATGATTTGTCTAGAGTAGGTAGATATAAGTTCAACAAGAAACTTGCATTAAACTTAAGAATTGCAAATCAAATAGCTGCTAATGACATTATTAATCCATCAACTGGAGAAATAATGGTTGAAAGCGGCCAAAAAATTAGTAGAACAATTGCTGAAGAAATTAGAAATGTAGGAATAAATTCAGTTGATGTTTTAGTGGAAGATAGAGTTGTAAGAGTAATCGGAAATAACTTTGTTGATATAACTAAGCATGTTAACTTTGATGTAACAGACTTAAACATTAAGGAATATGTACATTACCCTACATTAAGAGAAATTTTAGATAATTACTCTGATGAAGATTCAATAAAAGAAGAAATCAAGAAAAATATCAATAAATTAATTCCTAAGCATATTATAAGAGATGATATTTTTGCGACTATTAGTTACGAAATTGGATTGGCTTATAATATAGGATATGTTGACGATATTGATCATCTTGGAAATAGAAGAATTAGATCAGTTGGTGAATTACTACAAAACCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAAAGAATGACTATTCAAGATCAAGAAGCAATTACTCCTCAAATGTTAATAAACATTAGACCAGTAGCTGCTGCTATTAAAGAATTCTTTGGTAGTTCTCAATTATCACAATTCATGGATCAGATTAACCCACTTTCAGAATTAACTCACAAGAGAAGATTATCTGCTCTTGGACCAGGTGGTTTATCAAGAGAAAGAGCTGGTTTTGAAGTTAGAGACGTTCACCATTCTCATTATGGAAGAATGTGTCCTATCGAGACTCCAGAAGGACCTAACATAGGTCTTATAAACTCCTTAGCAACATTTGCAAGAGTTAATGAATATGGGTTTATAGAAACACCATATAGAATTATAGATAAAGAAACTAATACAATTACAAATGAAATAAGATATTTTACGGCAGATGAGGAAGATCAATATTTAGTTGCACAAGCTAAAGAACCGATTGACGGAAATGGTCACTTTGTTGATAAAAAGGTAACAGTAAGAAATAAGGAAGATGTATTTGTTGTACCAGCAGAAGATGTAGATTTAATAGACGTATCGCCTAGACAAATAGTATCAGTTGCTACTGCAATGATACCTTTCCTTGAGAATGACGATGCCTCAAGAGCACTGATGGGATCAAACATGCAACGTCAAGCTGTTCCATTATTAAAGACTCAAGCTCCTATCGTTGGTACAGGAATAGAGTACAAAGCAGCAGTAGACTCAGGAGTACTTCCTAAGGCTAAAAATGCTGGTGTTGTAACTTATGTAAGTGCTAACGAAGTGAGAATTAAAAGAGATATTGATGGCGGAATTGATACTTATAAATTACTTAAGTTTAAGAGAAGTAACCAAGGTATGTGCATAAATCAACGACCAATAGTTGATAAAGGTGAAATAGTATTTAAGAATCAAGTATTAGCTGATGGTCCATCAACAGATCTAGGTGAAATATCATTAGGTAAAAATATCAGAATGGGATTCATTACGTGGGAAGGATATAACTACGAAGATGCTATGCTTATTTCTGAAGAACTAGTTAGAGAAGATGTATTTACATCTATTCATATAGAAGAATATGAATGTGAAGCTAGAGACACAAAATTAGGACCAGAAGAAATTACTAGAGATATTCCTAATGTAAGTGAAGATGCACTTAAGGATATCGATGAAAGAGGAATAATAAGAGTAGGTGCTGAAGTAAGATCTGGAGATATTCTTGTTGGTAAGGTTACTCCAAAGGGTGAAACTGAATTAACAGCTGAAGAAAGACTGTTAAGAGCAATATTCGGTGAAAAGGCAAGAGAAGTAAGAGATACTTCATTAAGAGCTCCTCATGGTGAAGCTGGTATAATTGTAGATGTTAAAGTGTTTACAAGAGAAAATGGAGACGAATTAAATCCAGGCGTAAATGAACTTGTAAGAGCTTATATTGCGCAAAAGAGAAAGATATCTGTAGGGGATAAGATGGCTGGACGTCATGGTAACAAGGGGGTTATCTCAAGAGTACTTCCTGAAGAAGATATGCCATTTTTACCAGACGGAAGACCGCTACAAATATGTTTAAATCCTCTAGGGGTTCCTTCACGTATGAACATCGGTCAGGTACTTGAAGTTCACTTAGGATGGGCTGCTAGCCAATTAGGATGGCATATAGCTACTCCAGTATTTGATGGAGCAACTGAAGAAGATATAGAAGAATGTCTTGAAAAAGCAGGTTATAATGCTAATGGTAAAACTGTTTTATATGATGGTAGAACAGGAGAACCATTTGATAATGAAGTTACAGTTGGTATAATGTATATCTTAAAGCTAGCTCACTTAGTTGACGATAAGATTCATGCTAGATCAACTGGACCATACTCACTAGTTACACAACAACCACTTGGAGGTAAAGCTCAATTTGGTGGTCAAAGATTTGGTGAAATGGAAGTTTGGGCATTAGAAGCATATGGTGCTGCGCATACATTACAAGAAATATTAACTGTTAAGTCAGATGATGTTGTAGGTAGAGTTAAGACATATGAAGCAATAGTTAAGGGTGAAAATATCCCTGAACCAGGTGTTCCAGAATCATTTAAGGTTCTTATTAAAGAACTTCAAGCTCTTTGCTTAGACATTAAAGTTTTAAATGAAGAAAATCAAGAAGTTCAATTAAAAGAATTCGCAGATGAGGATATGGAAAACTTAGAGGTGAATATAGAAGGAACAGAAGAATTTACTTCTGAACCAGAAGCGGAAATTGATGATAGCTATACAGTAGAAGAAGTAGAACCAGAACAAGAAGAAGATTTCGAAAGTTTTCAAATCGAGGGACTACAAGAAGATTTAGTACTAGATGATTTTAATGACGAACACTAA
PROTEIN sequence
Length: 1235
MVHPVQVGKRTRMSFGKVKDVTEMPNLIEVQLDSYQWFLREGLHEVFDDVNPISNFTGNLVLEFVDYKLDMDNIKYSVEECKERDATYAAPLKVSVRLQNNETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYSYSRDKSGKKLFSSTVIPNRGAWLEYETDSNDVIYVRIDKTRKLPITILGRAMGFGSDQELLDYFGEEERFKATIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAVSLIDSLFFDAKRYDLSRVGRYKFNKKLALNLRIANQIAANDIINPSTGEIMVESGQKISRTIAEEIRNVGINSVDVLVEDRVVRVIGNNFVDITKHVNFDVTDLNIKEYVHYPTLREILDNYSDEDSIKEEIKKNINKLIPKHIIRDDIFATISYEIGLAYNIGYVDDIDHLGNRRIRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQMLINIRPVAAAIKEFFGSSQLSQFMDQINPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATFARVNEYGFIETPYRIIDKETNTITNEIRYFTADEEDQYLVAQAKEPIDGNGHFVDKKVTVRNKEDVFVVPAEDVDLIDVSPRQIVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKTQAPIVGTGIEYKAAVDSGVLPKAKNAGVVTYVSANEVRIKRDIDGGIDTYKLLKFKRSNQGMCINQRPIVDKGEIVFKNQVLADGPSTDLGEISLGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSIHIEEYECEARDTKLGPEEITRDIPNVSEDALKDIDERGIIRVGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRAPHGEAGIIVDVKVFTRENGDELNPGVNELVRAYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASQLGWHIATPVFDGATEEDIEECLEKAGYNANGKTVLYDGRTGEPFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDIKVLNEENQEVQLKEFADEDMENLEVNIEGTEEFTSEPEAEIDDSYTVEEVEPEQEEDFESFQIEGLQEDLVLDDFNDEH*