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71_007_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_57_1
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

494..715
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXG0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:KFI56550.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
71_007_scaffold_57_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

712..1716
DNA (1005bp) protein (335aa)
ABC transporter n=1 Tax=Salinivibrio costicola RepID=UPI000395511A
Abi family protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
71_007_scaffold_57_3
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1957..2388)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI55461.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
71_007_scaffold_57_4
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2394..2900)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y0L6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI48935.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
71_007_scaffold_57_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3045..4268)
DNA (1224bp) protein (408aa)
Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1G5_BIFLN
Integrase {ECO:0000313|EMBL:AIW44659.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
phage integrase
71_007_scaffold_57_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4474..5568)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=6 Tax=Bifidobacterium RepID=E4NXI0_BIFBP
engD; GTP-dependent nucleic acid-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_007_scaffold_57_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5740..6081
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2H8T9_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31676.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_57_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6145..6930
DNA (786bp) protein (262aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVE9_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31675.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ErfK/YbiS/YcfS/YnhG family protein
71_007_scaffold_57_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7032..8129
DNA (1098bp) protein (366aa)
Glycosyltransferase {ECO:0000313|EMBL:KFI94247.1}; EC=2.4.1.212 {ECO:0000313|EMBL:KFI94247.1};; EC=2.4.1.226 {ECO:0000313|EMBL:KFI94247.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Family 2 glycosyl transferase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M0U4_BIFBI
wcaA; putative glycosyl transferase
71_007_scaffold_57_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8266..8949
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER51_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31673.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_57_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9027..10121
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARV0_BIFLN
Membrane protein {ECO:0000313|EMBL:KFI94245.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_007_scaffold_57_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10397..11212
DNA (816bp) protein (272aa)
Transcriptional regulator, LysR family n=2 Tax=Bifidobacterium bifidum RepID=E4NXG1_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31670.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LysR family transcriptional regulator
71_007_scaffold_57_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11580..12392
DNA (813bp) protein (271aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:KFI94243.1}; EC=2.7.1.105 {ECO:0000313|EMBL:KFI94243.1};; EC=3.1.3.46 {ECO:0000313|EMBL:KFI94243.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFC3_9BIFI
hypothetical protein
71_007_scaffold_57_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12520..13812
DNA (1293bp) protein (431aa)
Xanthine/uracil permease n=8 Tax=Bifidobacterium RepID=B3DSH7_BIFLD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31668.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
uracil-xanthine permease
71_007_scaffold_57_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14259..15542)
DNA (1284bp) protein (428aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=D2Q5M7_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31666.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
AraC family transcriptional regulator
71_007_scaffold_57_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15569..15718
DNA (150bp) protein (50aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31665.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_57_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15814..16434
DNA (621bp) protein (207aa)
galactoside O-acetyltransferase; K00661 maltose O-acetyltransferase [EC:2.3.1.79]
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035C652E
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31664.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_57_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16608..17324
DNA (717bp) protein (239aa)
Short-chain dehydrogenase {ECO:0000313|EMBL:KFI94239.1}; EC=1.1.1.304 {ECO:0000313|EMBL:KFI94239.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.276)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFC0_9BIFI
71_007_scaffold_57_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17479..19596
DNA (2118bp) protein (706aa)
Possible ATP-dependent RNA helicase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5U3_BIFLO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31662.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ATP-dependent RNA helicase
71_007_scaffold_57_20
unknown

Not on your lists

comp(19506..20180)
DNA (675bp) protein (225aa)

This feature has no annotations

71_007_scaffold_57_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20711..21499)
DNA (789bp) protein (263aa)
TIGR00245 family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNB4_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31661.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
conserved hypothetical protein TIGR00245
71_007_scaffold_57_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21496..22350)
DNA (855bp) protein (285aa)
Putative ABC transport system permease protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER41_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31660.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease; K02068 putative ABC transport system ATP-binding protein
71_007_scaffold_57_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22525..23229
DNA (705bp) protein (235aa)
two-component response regulator (EC:2.7.13.3)
Two-component response regulator n=2 Tax=Bifidobacterium RepID=E4NYA6_BIFBP
Two-component response regulator {ECO:0000313|EMBL:KFI90164.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_007_scaffold_57_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23242..24441
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein n=1 Tax=Bifidobacterium minimum RepID=UPI0003B70C4E
Signal transduction histidine kinase
71_007_scaffold_57_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25813..26127
DNA (315bp) protein (105aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31657.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_57_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26346..27140
DNA (795bp) protein (265aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBB2_BIFLI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31656.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
azlC; branched-chain amino acid permease
71_007_scaffold_57_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27137..27475
DNA (339bp) protein (113aa)
Branched-chain amino acid permease n=2 Tax=Bifidobacterium RepID=A1A137_BIFAA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31655.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
alzD; branched-chain amino acid permease
71_007_scaffold_57_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27483..28847)
DNA (1365bp) protein (455aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUG4_BIFLJ
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:KFI90159.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
branched-chain amino acid transport system II carrier protein; K03311 branched-chain amino acid:cation transporter, LIVCS family
71_007_scaffold_57_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29047..30408)
DNA (1362bp) protein (454aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFU3_9BIFI
71_007_scaffold_57_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30473..33727
DNA (3255bp) protein (1085aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHC0_BIFBI
UPF0182 protein BBSC_1572 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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