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71_012_scaffold_65

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Displaying items 91-120 of 209 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_65_91
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(93781..95214)
DNA (1434bp) protein (478aa)
dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=236 Tax=Enterobacteriaceae RepID=B2U1Z5_SHIB3
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EGI44649.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
71_012_scaffold_65_92
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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95462..95938
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1374 Tax=Enterobacteriaceae RepID=GREA_ECO57
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_012_scaffold_65_93
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(96094..96387)
DNA (294bp) protein (98aa)
RNA-binding protein YhbY n=1405 Tax=Enterobacteriaceae RepID=YHBY_ECO57
yhbY; putative RNA-binding protein; K07574 RNA-binding protein
RNA-binding protein YhbY {ECO:0000313|EMBL:EMV54269.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
71_012_scaffold_65_94
Enterobacter hormaechei, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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96513..96647
DNA (135bp) protein (45aa)
rlmE; 23S rRNA methyltransferase; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=888063 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Escherichia coli RepID=G0F2H6_ECOLX
71_012_scaffold_65_95
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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96644..97117
DNA (474bp) protein (158aa)
rrmJ; 23S rRNA methyltransferase J; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Escherichia coli p0305293.12 RepID=N4ILL7_ECOLX
71_012_scaffold_65_96
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97252..98442
DNA (1191bp) protein (397aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Escherichia coli KTE19 RepID=S0VBW3_ECOLX
hflB; ATP-dependent metalloprotease
71_012_scaffold_65_97
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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98430..99074
DNA (645bp) protein (215aa)
hflB; ATP-dependent metalloprotease; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
ATP-dependent zinc metalloprotease FtsH n=6 Tax=Shigella RepID=Q31W55_SHIBS
71_012_scaffold_65_98
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99164..100012
DNA (849bp) protein (283aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
7,8-dihydropteroate synthase n=6 Tax=Escherichia coli RepID=C3SSK7_ECOLX
71_012_scaffold_65_99
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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100005..101342
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=766145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri VA-6.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=8 Tax=Enterobacteriaceae RepID=F5N7J9_SHIFL
71_012_scaffold_65_100
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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101570..101902
DNA (333bp) protein (111aa)
Protein export-membrane protein n=340 Tax=Enterobacteriaceae RepID=J7R9F2_ECOLX
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EFJ87249.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
71_012_scaffold_65_trna_1
unknown

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101917..102000
DNA (84bp)
transferRNA Leu
71_012_scaffold_65_101
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102462..104087
DNA (1626bp) protein (542aa)
Arylsulfatase {ECO:0000313|EMBL:EGB87521.1}; EC=3.1.6.- {ECO:0000313|EMBL:EGB87521.1};; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
Putative alkaline phosphatase I n=1 Tax=Escherichia coli (strain SE11) RepID=B6I1P7_ECOSE
yhbX; Outer-membrane protein yhbX
71_012_scaffold_65_102
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(104095..105438)
DNA (1344bp) protein (448aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Escherichia coli W26 RepID=I0VVF5_ECOLX
71_012_scaffold_65_trna_2
unknown

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105786..105859
DNA (74bp)
transferRNA Met
71_012_scaffold_65_103
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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106069..106521
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=796 Tax=Enterobacteriaceae RepID=RIMP_ECO24
yhbC; hypothetical protein; K09748 ribosome maturation factor RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
71_012_scaffold_65_104
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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106549..108036
DNA (1488bp) protein (496aa)
Transcription termination/antitermination factor NusA n=273 Tax=Escherichia coli RepID=B1LFS1_ECOSM
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
71_012_scaffold_65_105
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108061..110733
DNA (2673bp) protein (891aa)
Translation initiation factor IF-2 n=2 Tax=Escherichia coli RepID=L3C391_ECOLX
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
infB; translation initiation factor IF-2
71_012_scaffold_65_106
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110897..111298
DNA (402bp) protein (134aa)
Ribosome-binding factor A n=4 Tax=Enterobacteriaceae RepID=C1HIH1_9ESCH
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
71_012_scaffold_65_107
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111298..112242
DNA (945bp) protein (315aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
tRNA pseudouridine synthase B n=1113 Tax=Enterobacteriaceae RepID=TRUB_ECO57
71_012_scaffold_65_108
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


112391..112618
DNA (228bp) protein (76aa)
30S ribosomal protein S15 n=2 Tax=Escherichia coli RepID=N2RD86_ECOLX
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
71_012_scaffold_65_109
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112865..115000
DNA (2136bp) protein (712aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
Polyribonucleotide nucleotidyltransferase n=481 Tax=Enterobacteriaceae RepID=PNP_ECO24
polynucleotide phosphorylase/polyadenylase
71_012_scaffold_65_110
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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115109..115993
DNA (885bp) protein (295aa)
Lipoprotein NlpI n=1237 Tax=Enterobacteriaceae RepID=NLPI_ECO57
lipoprotein NlpI; K05803 lipoprotein NlpI
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
71_012_scaffold_65_111
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116292..118037
DNA (1746bp) protein (582aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
deaD; ATP-dependent RNA helicase DeaD; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
ATP-dependent RNA helicase DeaD n=125 Tax=Escherichia coli RepID=B7M070_ECO8A
71_012_scaffold_65_112
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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118191..119435
DNA (1245bp) protein (415aa)
Tryptophan-specific transport protein n=333 Tax=Enterobacteriaceae RepID=J7R672_ECOLX
tryptophan permease
Low affinity tryptophan permease {ECO:0000313|EMBL:EGU97923.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
71_012_scaffold_65_113
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119553..120560)
DNA (1008bp) protein (336aa)
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family {ECO:0000313|EMBL:EFJ97251.1}; EC=1.-.-.- {ECO:0000313|EMBL:EFJ97251.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Uncharacterized protein YhbW n=714 Tax=Enterobacteriaceae RepID=YHBW_ECOL6
yhbW; putative enzyme
71_012_scaffold_65_114
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120641..121519)
DNA (879bp) protein (293aa)
Uncharacterized protein YhbV n=207 Tax=Enterobacteriaceae RepID=YHBV_ECOLI
yhbV; hypothetical protein
Peptidase, U32 family {ECO:0000313|EMBL:ESA66141.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_012_scaffold_65_115
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(121528..122523)
DNA (996bp) protein (332aa)
yhbU; collagenase-like peptidase; K08303 putative protease [EC:3.4.-.-]
Putative collagenase {ECO:0000313|EMBL:CCK48472.1}; EC=3.4.-.- {ECO:0000313|EMBL:CCK48472.1};; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
Peptidase, U32 family n=557 Tax=Enterobacteriaceae RepID=B2NAR9_ECOLX
71_012_scaffold_65_116
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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122732..123256
DNA (525bp) protein (175aa)
Uncharacterized protein YhbT n=1119 Tax=Enterobacteriaceae RepID=YHBT_ECO57
hypothetical protein
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EID68135.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
71_012_scaffold_65_117
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123250..123753
DNA (504bp) protein (168aa)
yhbS; putative acyltransferase with acyl-CoA N-acyltransferase domain; K03824 putative acetyltransferase [EC:2.3.1.-]
Uncharacterized N-acetyltransferase YhbS n=1340 Tax=Enterobacteriaceae RepID=YHBS_ECO57
Acyltransferase {ECO:0000313|EMBL:EQZ98233.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
71_012_scaffold_65_118
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123740..124042)
DNA (303bp) protein (101aa)
UPF0213 protein YhbQ n=22 Tax=Escherichia coli RepID=YHBQ_ECO24
GIY-YIG nuclease superfamily protein; K07461 putative endonuclease
UPF0213 protein YhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
Displaying items 91-120 of 209 in total

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