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71_012_scaffold_65

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Displaying items 1-30 of 209 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_65_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154..912)
DNA (759bp) protein (253aa)
yhdZ; amino acid ABC transporter ATP-binding protein; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
Amino acid ABC transporter, ATP-binding protein n=352 Tax=Enterobacteriaceae RepID=A7ZSG7_ECO24
Uncharacterized protein {ECO:0000313|EMBL:KEO29323.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
71_012_scaffold_65_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(920..2023)
DNA (1104bp) protein (368aa)
Amino acid ABC transporter permease component n=145 Tax=Escherichia coli RepID=B6I1Z1_ECOSE
yhdY; transport system permease protein; K09971 general L-amino acid transport system permease protein
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:ABV19918.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
71_012_scaffold_65_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2033..3214)
DNA (1182bp) protein (394aa)
Putative amino-acid ABC transporter permease protein YhdX n=390 Tax=Enterobacteriaceae RepID=YHDX_ECOLI
putative amino-acid transporter subunit
ABC transporter, permease protein {ECO:0000313|EMBL:EII36723.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
71_012_scaffold_65_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..4307)
DNA (1026bp) protein (342aa)
Lysine-arginine-ornithine-binding periplasmic protein n=44 Tax=Escherichia coli RepID=D8EE76_ECOLX
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:KEN65001.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
yhdW; periplasmic binding transport protein; K09969 general L-amino acid transport system substrate-binding protein
71_012_scaffold_65_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..4959)
DNA (222bp) protein (74aa)
Uncharacterized protein YhdV n=1009 Tax=Enterobacteriaceae RepID=YHDV_ECO57
yhdV; hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:EQQ02232.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
71_012_scaffold_65_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5065..5355
DNA (291bp) protein (97aa)
Uncharacterized protein n=91 Tax=Escherichia coli RepID=J7QA02_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU56744.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE14.;"
71_012_scaffold_65_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5212..8316)
DNA (3105bp) protein (1035aa)
Acriflavine resistance protein n=114 Tax=Escherichia coli RepID=B6I1Y6_ECOSE
Acriflavine resistance protein {ECO:0000313|EMBL:BAG79071.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
acrF; acriflavine resistance protein
71_012_scaffold_65_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8328..9485)
DNA (1158bp) protein (386aa)
Multidrug export protein AcrE n=496 Tax=Enterobacteriaceae RepID=ACRE_ECOLI
acrE; hypothetical protein; K03585 membrane fusion protein
AcrA Membrane Fusion Protein {ECO:0000313|EMBL:EHW12431.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_012_scaffold_65_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9884..10546
DNA (663bp) protein (221aa)
DNA-binding transcriptional regulator n=226 Tax=Enterobacteriaceae RepID=B7LHX1_ECO55
envR; DNA-binding transcriptional regulator EnvR
Putative acrEF/envCD operon repressor {ECO:0000313|EMBL:EFK50841.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
71_012_scaffold_65_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10549..10728)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI000372E9D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD89169.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
71_012_scaffold_65_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..11696)
DNA (885bp) protein (295aa)
yhdJ; methyltransferase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
Methyltransferase n=63 Tax=Escherichia coli RepID=B7LHW9_ECO55
71_012_scaffold_65_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11782..12324)
DNA (543bp) protein (181aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
tRNA-dihydrouridine synthase n=1 Tax=Shigella flexneri CDC 796-83 RepID=E7TGJ8_SHIFL
tRNA-dihydrouridine synthase B
71_012_scaffold_65_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12294..12962)
DNA (669bp) protein (223aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
tRNA-dihydrouridine synthase n=3 Tax=Escherichia coli RepID=S0VJE7_ECOLX
nifR3 family TIM-barrel protein
71_012_scaffold_65_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13291..14172)
DNA (882bp) protein (294aa)
prmA; 50S ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Ribosomal protein L11 methyltransferase n=44 Tax=Escherichia coli RepID=PRMA_ECO55
71_012_scaffold_65_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14184..15635)
DNA (1452bp) protein (484aa)
Sodium/pantothenate symporter n=726 Tax=Enterobacteriaceae RepID=PANF_ECOLI
panF; sodium/panthothenate symporter; K14392 sodium/pantothenate symporter
Sodium/pantothenate symporter {ECO:0000313|EMBL:KDZ16335.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
71_012_scaffold_65_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15625..15867)
DNA (243bp) protein (81aa)
Uncharacterized protein n=945 Tax=Enterobacteriaceae RepID=B2N9W8_ECOLX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFE62099.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_012_scaffold_65_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15960..16916)
DNA (957bp) protein (319aa)
Kinase, pfkB family n=22 Tax=Enterobacteriaceae RepID=B2U2N2_SHIB3
PfkB family kinase
Sugar kinase {ECO:0000313|EMBL:EYY78547.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
71_012_scaffold_65_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16927..17742)
DNA (816bp) protein (272aa)
Transcriptional regulator, DeoR family n=90 Tax=Escherichia coli RepID=D5D246_ECOKI
DeoR family transcriptional regulator
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:EYY78548.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
71_012_scaffold_65_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18099..18953
DNA (855bp) protein (285aa)
putative fructose/tagatose biphosphate aldolase; K08302 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
Tagatose-bisphosphate aldolase {ECO:0000256|SAAS:SAAS00058081}; EC=4.1.2.40 {ECO:0000256|SAAS:SAAS00058081};; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
Class II aldolase, tagatose bisphosphate family n=55 Tax=Enterobacteriaceae RepID=E7HGZ0_ECOLX
71_012_scaffold_65_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18989..19879
DNA (891bp) protein (297aa)
Sugar ABC transporter n=47 Tax=Escherichia coli RepID=V4V913_ECOLX
sugar uptake ABC transporter periplasmicsolute-binding protein precursor; K10439 ribose transport system substrate-binding protein
Putative ribose ABC transporter {ECO:0000313|EMBL:CEK07271.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
71_012_scaffold_65_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19940..21439
DNA (1500bp) protein (500aa)
putative sugar uptake ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
D-ribose transporter ATP binding protein n=44 Tax=Escherichia coli RepID=V4VKW7_ECOLX
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CEK07270.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
71_012_scaffold_65_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21440..22429
DNA (990bp) protein (330aa)
Ribose transport system permease protein rbsC n=67 Tax=Enterobacteriaceae RepID=E2QET3_ECOLX
ribose transport system permease protein rbsC
Sugar ABC transporter permease {ECO:0000313|EMBL:EZD31954.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_012_scaffold_65_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22451..23413
DNA (963bp) protein (321aa)
Possible sugar kinase n=85 Tax=Escherichia coli RepID=C8TIF8_ECO26
sugar kinase
Sugar kinase {ECO:0000313|EMBL:EYY78553.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
71_012_scaffold_65_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23410..24456
DNA (1047bp) protein (349aa)
Uncharacterized protein n=50 Tax=Enterobacteriaceae RepID=C8TIF7_ECO26
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD31956.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_012_scaffold_65_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24548..25897)
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase biotin carboxylase subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:KEJ44608.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KEJ44608.1};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Acetyl-CoA carboxylase biotin carboxylase subunit n=203 Tax=Enterobacteriaceae RepID=B6I1X6_ECOSE
71_012_scaffold_65_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25908..26378)
DNA (471bp) protein (157aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (EC:6.4.1.2); K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1328 Tax=Enterobacteriaceae RepID=BCCP_ECO57
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EGI09649.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
71_012_scaffold_65_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27356..28330)
DNA (975bp) protein (325aa)
Quinone oxidoreductase, YhdH family n=579 Tax=Enterobacteriaceae RepID=A7ZSE8_ECO24
yhdH; oxidoreductase, Zn-dependent and NAD(P)-binding
YhdH, a putative quinone oxidoreductase {ECO:0000313|EMBL:AJA28254.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7 str. SS52.;"
71_012_scaffold_65_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28482..30422
DNA (1941bp) protein (647aa)
Uncharacterized protein n=238 Tax=Enterobacteriaceae RepID=J7R6E3_ECOLX
Putative lipoprotein {ECO:0000313|EMBL:EGU97096.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
regulatory protein CsrD
71_012_scaffold_65_29
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30727..31770
DNA (1044bp) protein (348aa)
Regulator of ftsI n=18 Tax=Enterobacteriaceae RepID=C3SRN8_ECOLX
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Rod shape-determining protein MreB {ECO:0000313|EMBL:ESG09705.1}; TaxID=1124962 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673.;"
71_012_scaffold_65_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31836..32939
DNA (1104bp) protein (368aa)
Rod shape-determining protein n=418 Tax=Enterobacteriaceae RepID=C3SRP5_ECOLX
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:EII25101.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Displaying items 1-30 of 209 in total

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