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71_012_scaffold_65

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Displaying items 121-150 of 209 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_65_119
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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124093..124536
DNA (444bp) protein (148aa)
UPF0306 protein YhbP n=8 Tax=Enterobacteriaceae RepID=YHBP_SHIB3
hypothetical protein; K09979 hypothetical protein
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
71_012_scaffold_65_120
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124516..125034)
DNA (519bp) protein (173aa)
yhbO; intracellular protease; K05520 protease I [EC:3.2.-.-]
Putative uncharacterized protein yhbO n=1 Tax=Escherichia fergusonii ECD227 RepID=F0JS53_ESCFE
General stress protein 18 {ECO:0000313|EMBL:ESA94777.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
71_012_scaffold_65_121
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125162..125797
DNA (636bp) protein (212aa)
Predicted nucleoside-diphosphate-sugar epimerase n=62 Tax=Enterobacteriaceae RepID=E0J2U0_ECOLW
yraR; nucleoside-diphosphate-sugar epimerase
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ESD19862.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
71_012_scaffold_65_122
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125870..126910
DNA (1041bp) protein (347aa)
Predicted permease n=112 Tax=Escherichia coli RepID=C8TXE8_ECO10
yraQ; putative permease; K07089
Putative permease family protein {ECO:0000313|EMBL:END50541.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
71_012_scaffold_65_123
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(127024..127599)
DNA (576bp) protein (192aa)
Uncharacterized protein YraP n=1098 Tax=Enterobacteriaceae RepID=YRAP_ECO57
transport-associated protein
Uncharacterized protein {ECO:0000313|EMBL:EOU77672.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
71_012_scaffold_65_124
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127609..128199)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24
yraO; DnaA initiator-associating protein DiaA; K12961 DnaA initiator-associating protein
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
71_012_scaffold_65_125
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128219..128614)
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=12 Tax=Escherichia coli RepID=YRAN_ECO8A
yraN; hypothetical protein; K07460 putative endonuclease
UPF0102 protein YraN {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=585034 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O8 (strain IAI1).;"
71_012_scaffold_65_126
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128572..130608)
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=140 Tax=Escherichia coli RepID=A7ZS43_ECO24
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
yraM; hypothetical protein; K07121
71_012_scaffold_65_127
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130672..131532
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Ribosomal RNA small subunit methyltransferase I n=238 Tax=Escherichia coli RepID=A7ZS42_ECO24
yraL; SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase
71_012_scaffold_65_128
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131575..132666)
DNA (1092bp) protein (364aa)
Predicted fimbrial-like adhesin protein n=91 Tax=Escherichia coli RepID=C8TI54_ECO26
yraK; fimbrial-like adhesin protein (lpfD-like)
YraK protein {ECO:0000313|EMBL:CAU99758.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
71_012_scaffold_65_129
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132677..135193)
DNA (2517bp) protein (839aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=I2PJE0_ECOLX
yraJ; putative outer membrane protein; K07347 outer membrane usher protein
Type VII secretion system (T7SS), usher family protein {ECO:0000313|EMBL:EMX47096.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
71_012_scaffold_65_130
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135223..135918)
DNA (696bp) protein (232aa)
Gram-negative pili assembly chaperone protein n=274 Tax=Enterobacteriaceae RepID=A7ZS39_ECO24
periplasmic pilin chaperone
Gram-negative pili assembly chaperone, N-terminal domain protein {ECO:0000313|EMBL:EHW13117.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_012_scaffold_65_131
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135998..136582)
DNA (585bp) protein (195aa)
Fimbrial protein n=276 Tax=Enterobacteriaceae RepID=A7ZS38_ECO24
yraH; fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:EGI44611.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
71_012_scaffold_65_132
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136982..137683)
DNA (702bp) protein (234aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6); K02080 galactosamine-6-phosphate isomerase [EC:5.3.1.-]
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
Galactosamine-6-phosphate isomerase n=181 Tax=Enterobacteriaceae RepID=E0J2V1_ECOLW
71_012_scaffold_65_133
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137738..138529)
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID; K10986 PTS system, galactosamine-specific IID component
N-acetylgalactosamine-specific PTS system transporter subunit IID {ECO:0000313|EMBL:AFJ30816.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
71_012_scaffold_65_134
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138519..139322)
DNA (804bp) protein (268aa)
agaC; PTS system N-acetylgalactosamine-specific transporter subunit IIC (EC:2.7.1.69); K10985 PTS system, galactosamine-specific IIC component
N-acetylgalactosamine-specific enzyme IIC component of PTS n=9 Tax=Escherichia coli RepID=B7M047_ECO8A
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:ESD19795.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
71_012_scaffold_65_135
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139361..139837)
DNA (477bp) protein (159aa)
agaB; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69); K10984 PTS system, galactosamine-specific IIB component [EC:2.7.1.69]
PTS system, mannose/fructose/sorbose family, IIB subunit n=131 Tax=Enterobacteriaceae RepID=B1IRH8_ECOLC
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EOW01048.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
71_012_scaffold_65_136
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140004..140864)
DNA (861bp) protein (287aa)
agaY; tagatose-1,6-bisphosphate aldolase agaY (EC:4.1.2.-); K08302 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammap
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1141 Tax=Enterobacteriaceae RepID=KBAY_ECO24
71_012_scaffold_65_137
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140877..142031)
DNA (1155bp) protein (385aa)
agaS; tagatose-6-phosphate ketose/aldose isomerase; K02082 tagatose-6-phosphate ketose/aldose isomerase [EC:5.-.-.-]
Tagatose-6-phosphate ketose/aldose isomerase n=9 Tax=Escherichia coli RepID=B7M044_ECO8A
Putative tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EMX47088.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
71_012_scaffold_65_138
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142382..143515)
DNA (1134bp) protein (378aa)
agaA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K02079 N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
N-acetylglucosamine-6-phosphate deacetylase n=106 Tax=Escherichia coli RepID=B7M043_ECO8A
71_012_scaffold_65_139
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143512..143946)
DNA (435bp) protein (145aa)
putative phosphotransferase system protein; K02744 PTS system, N-acetylgalactosamine-specific IIA component [EC:2.7.1.69]
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
71_012_scaffold_65_140
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143964..144842)
DNA (879bp) protein (293aa)
agaE; N-acetylgalactosamine-specific IID component of PTS system (EC:2.7.1.69); K02747 PTS system, N-acetylgalactosamine-specific IID component
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:BAI56511.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
71_012_scaffold_65_141
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144832..145596)
DNA (765bp) protein (255aa)
PTS system sorbose-specific iic component family protein n=1 Tax=Escherichia coli 95.0083 RepID=L9IAA9_ECOLX
N-acetylgalactosamine-specific enzyme IIC component of PTS; K02746 PTS system, N-acetylgalactosamine-specific IIC component
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EHX27450.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
71_012_scaffold_65_142
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145541..146095)
DNA (555bp) protein (185aa)
agaV; acetylgalactosamine-specific PTS system enzyme IIB component; K02745 PTS system, N-acetylgalactosamine-specific IIB component [EC:2.7.1.69]
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
71_012_scaffold_65_143
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146118..147398)
DNA (1281bp) protein (427aa)
kbaZ; tagatose 6-phosphate aldolase 1, KbaZ subunit (EC:4.1.2.40); K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=8 Tax=Escherichia coli RepID=KBAZ_ECO8A
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000255|HAMAP-Rule:MF_01295}; TaxID=585034 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O8 (strain IAI1).;"
71_012_scaffold_65_144
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147647..148456
DNA (810bp) protein (270aa)
Putative aga operon transcriptional repressor n=1001 Tax=Enterobacteriaceae RepID=AGAR_ECO57
agaR; DNA-binding transcriptional repressor of the aga regulon; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KDU32643.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
71_012_scaffold_65_145
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148511..148975)
DNA (465bp) protein (155aa)
Uncharacterized protein n=181 Tax=Enterobacteriaceae RepID=A7ZS24_ECO24
yhaV; hypothetical protein
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFK74322.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
71_012_scaffold_65_146
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148975..149310)
DNA (336bp) protein (112aa)
Antitoxin PrlF n=560 Tax=Enterobacteriaceae RepID=PRLF_ECOLI
sohA; regulator PrlF
HtrA suppressor protein {ECO:0000313|EMBL:EGW87699.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
71_012_scaffold_65_147
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149459..151030)
DNA (1572bp) protein (524aa)
Galactarate dehydrogenase {ECO:0000313|EMBL:AKE87453.1}; EC=4.2.1.42 {ECO:0000313|EMBL:AKE87453.1};; TaxID=1048254 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. C227-11.;"
garD; galactarate dehydrogenase (EC:4.2.1.42)
Galactarate dehydratase n=248 Tax=Enterobacteriaceae RepID=A7ZS22_ECO24
71_012_scaffold_65_148
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151405..152739
DNA (1335bp) protein (445aa)
Probable galactarate transporter n=660 Tax=Enterobacteriaceae RepID=GARP_ECO57
garP; putative (D)-galactarate transporter; K12299 MFS transporter, ACS family, probable galactarate transporter
Putative galactarate transporter {ECO:0000313|EMBL:EFK74317.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Displaying items 121-150 of 209 in total

View Taxonomy