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71_013_scaffold_4

Search features with annotation key words

Displaying items 121-150 of 169 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_4_120
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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142815..143390
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQF7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI92561.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_013_scaffold_4_121
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143366..144556
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5EB34_BIFLI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31212.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_013_scaffold_4_122
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144597..144842)
DNA (246bp) protein (82aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31211.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_013_scaffold_4_123
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145013..145159)
DNA (147bp) protein (49aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31210.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_124
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145463..146683
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PU85_9BACT
ATPase {ECO:0000313|EMBL:KFI92565.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein; K07133
71_013_scaffold_4_125
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146810..147451
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU91_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31208.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_013_scaffold_4_126
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

147574..147747
DNA (174bp) protein (58aa)
RelB/DinJ family addiction module antitoxin n=6 Tax=Bifidobacterium RepID=E5XZW0_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31207.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein; K07473 DNA-damage-inducible protein J
71_013_scaffold_4_127
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147879..148175)
DNA (297bp) protein (99aa)
Two component transcriptional regulator, LuxR family n=3 Tax=Bifidobacterium longum RepID=E4R3K1_BIFLM
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:KFI92568.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative two-component response regulator
71_013_scaffold_4_128
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(148165..148530)
DNA (366bp) protein (122aa)
Two component transcriptional regulator, LuxR family n=3 Tax=Bifidobacterium longum RepID=E4R3K1_BIFLM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31206.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
two component transcriptional regulator, luxr family
71_013_scaffold_4_129
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(148527..149195)
DNA (669bp) protein (223aa)
Histidine kinase, dimerization and phosphoacceptor region n=4 Tax=Bifidobacterium longum RepID=E4R3K2_BIFLM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31205.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
histidine kinase, dimerization and phosphoacceptor region
71_013_scaffold_4_130
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149134..149850)
DNA (717bp) protein (239aa)
Membrane invertase YidC n=1 Tax=Bifidobacterium longum E18 RepID=V6Y101_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31204.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC
71_013_scaffold_4_131
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150033..150503)
DNA (471bp) protein (157aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XWH1_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31203.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_132
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150884..152119
DNA (1236bp) protein (412aa)
MFS transporter, probably 3-Hydroxyphenyl propionate porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IKG1_BIFAP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31201.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
MFS transporter, probably 3-Hydroxyphenyl propionate porter
71_013_scaffold_4_133
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(152138..153625)
DNA (1488bp) protein (496aa)
Amino acid permease n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD86_9ACTN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31200.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
amino acid permease-associated protein
71_013_scaffold_4_134
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153707..154954)
DNA (1248bp) protein (416aa)
parathion hydrolase (EC:3.1.8.1)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YR98_9ACTO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31199.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_135
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155218..156063
DNA (846bp) protein (282aa)
UPI0003D79A9D related cluster n=1 Tax=unknown RepID=UPI0003D79A9D
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31198.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
short chain dehydrogenase
71_013_scaffold_4_136
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156229..156681
DNA (453bp) protein (151aa)
aldo/keto reductase (EC:1.1.1.91)
NADP-dependent aryl-alcohol dehydrogenase n=1 Tax=Streptomyces acidiscabies RepID=UPI000287C818
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31197.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_137
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156902..158509)
DNA (1608bp) protein (536aa)
Peptidase S10, serine carboxypeptidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI97_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31196.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
peptidase S10, serine carboxypeptidase
71_013_scaffold_4_138
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158764..159168)
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=4 Tax=Bifidobacterium RepID=E3EQY9_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31195.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
pyridoxamine 5'-phosphate oxidase; K07006
71_013_scaffold_4_139
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

159461..160168
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H8M4_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31194.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_013_scaffold_4_140
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160165..160665)
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
tpx; thiol peroxidase (EC:1.11.1.-); K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]
thiol peroxidase n=1 Tax=Brachybacterium muris RepID=UPI000349871A
71_013_scaffold_4_trna_3
unknown

Not on your lists

comp(160830..160902)
DNA (73bp)
transferRNA Ala
71_013_scaffold_4_141
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

161267..162163
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZS2_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD06332.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3); (Natronobacterium magadii).;"
71_013_scaffold_4_142
unknown

Not on your lists

162170..162439
DNA (270bp) protein (90aa)

This feature has no annotations

71_013_scaffold_4_143
unknown

Not on your lists

162500..162769
DNA (270bp) protein (90aa)

This feature has no annotations

71_013_scaffold_4_144
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162913..164154)
DNA (1242bp) protein (414aa)
putative cyclomaltodextrinase or neopullalanase (EC:3.2.1.135)
Putative cyclomaltodextrinase or neopullalanase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIC7_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31190.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_145
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164296..165000)
DNA (705bp) protein (235aa)
phosphoglycerate mutase family protein (EC:3.1.3.73); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase family protein n=2 Tax=Bifidobacterium RepID=C0BTB5_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31189.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_146
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165052..165450)
DNA (399bp) protein (133aa)
Ribosomal silencing factor RsfS n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSX3_BIFLS
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
iojap family protein; K09710 ribosome-associated protein
71_013_scaffold_4_147
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165496..166878)
DNA (1383bp) protein (461aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFI0_9BIFI
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_4_trna_2
unknown

Not on your lists

comp(167003..167073)
DNA (71bp)
transferRNA Gln
Displaying items 121-150 of 169 in total

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