ggKbase | organisms

Consensus taxonomy: Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: ALUMROCK_MS11_Chromatiales_related_55_29 Manually curated genome
Original version: ALUMROCK_MS11_Chromatiales_related_55_29

Properties

Avg. coverage: 1.00 Longest contig: 30.68 Kbp Bin length: 1.63 Mbp GC content: 54.70 %

Contigs count: 453 Features count: 2011 rRNAs count: 0 tRNAs count: 17

Genome completeness

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 3

Displaying items 351-400 of 453 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
ar11r2_scaffold_20305 Species: Ectothiorhodospira sp. PHS-1 (50%)	2	1678 bp	59.36	1.00	88.68
ar11r2_scaffold_2713 Species: Acidovorax sp. CF316 (50%)	2	6038 bp	56.62	1.00	91.72
ar11r2_scaffold_20304 Species: Halothiobacillus neapolitanus (50%)	2	1853 bp	55.42	1.00	95.84
ar11r2_scaffold_20309 Species: Thiocapsa marina (50%)	2	1707 bp	53.90	1.00	100.00
ar11r2_scaffold_41504 Species: Halothiobacillus neapolitanus (50%)	2	1064 bp	56.77	1.00	96.71
ar11r2_scaffold_36957 Species: Thioalkalivibrio sulfidiphilus (50%)	2	1363 bp	53.19	1.00	84.74
ar11r2_scaffold_36812 Species: Candidatus Contendobacter odensis (50%)	2	1620 bp	60.12	1.00	100.18
ar11r2_scaffold_36078 Species: Halothiobacillus neapolitanus (100%)	2	1501 bp	53.56	1.00	98.73
ar11r2_scaffold_41917 Species: Laribacter hongkongensis (50%)	2	1532 bp	54.44	1.00	97.52
ar11r2_scaffold_14431 Species: endosymbiont of unidentified scaly snail isolate Monju (50%)	2	2211 bp	55.45	1.00	87.25
ar11r2_scaffold_12525 Species: BJP_IG2102_Gammaproteobacteria_62_140 (50%)	2	2993 bp	64.08	1.00	100.03
ar11r2_scaffold_30672 Species: Halothiobacillus neapolitanus (50%)	2	2518 bp	57.51	1.00	93.17
ar11r2_scaffold_44350 Species: RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated (50%)	2	1130 bp	55.84	1.00	87.08
ar11r2_scaffold_31518 Species: Ectothiorhodospira sp. PHS-1 (50%)	2	1552 bp	55.61	1.00	98.78
ar11r2_scaffold_34378 Species: Cronobacter sakazakii (50%)	2	1327 bp	51.92	1.00	73.70
ar11r2_scaffold_14875 Species: Halothiobacillus neapolitanus (100%)	2	2611 bp	54.88	1.00	91.69
ar11r2_scaffold_26675 Species: Halothiobacillus neapolitanus (100%)	2	1610 bp	56.15	1.00	83.11
ar11r2_scaffold_7764 Species: RLO_Pseudomonas_59_9 (50%)	2	3071 bp	54.71	1.00	91.05
ar11r2_scaffold_11783 Species: Allochromatium vinosum (50%)	2	2530 bp	56.21	1.00	81.34
ar11r2_scaffold_65566 Species: RIFOXYA1_FULL_Xanthomonadales_68_6_curated (50%)	2	1489 bp	51.65	1.00	96.71
ar11r2_scaffold_28880 Species: RBG_16_Gamma2_64_11_curated (50%)	2	1532 bp	51.24	1.00	65.60
ar11r2_scaffold_8610 Species: mine drainage metagenome (50%)	2	4212 bp	59.92	1.00	89.46
ar11r2_scaffold_29224 Species: Halothiobacillus neapolitanus (50%)	2	1189 bp	56.18	1.00	91.34
ar11r2_scaffold_24659 Species: Thiobacillus prosperus (50%)	2	1833 bp	54.12	1.00	87.73
ar11r2_scaffold_32232 Species: Halothiobacillus neapolitanus (50%)	2	1388 bp	49.28	1.00	73.49
ar11r2_scaffold_16359 Species: Thiocapsa marina (50%)	2	1952 bp	49.85	1.00	78.07
ar11r2_scaffold_61373 Species: Thioploca ingrica (50%)	2	1549 bp	50.36	1.00	85.22
ar11r2_scaffold_45862 Species: Thioalkalivibrio sulfidiphilus (50%)	2	1226 bp	52.12	1.00	56.04
ar11r2_scaffold_41547 Species: Halorhodospira halochloris (50%)	2	1366 bp	53.07	1.00	84.99
ar11r2_scaffold_25021 Species: Halothiobacillus neapolitanus (50%)	2	2157 bp	55.17	1.00	93.19
ar11r2_scaffold_38063 Species: Halothiobacillus neapolitanus (50%)	2	1861 bp	59.22	1.00	81.89
ar11r2_scaffold_35808 Species: Arenimonas donghaensis (50%)	2	1116 bp	53.14	1.00	64.52
ar11r2_scaffold_36386 Species: endosymbiont of Riftia pachyptila (50%)	2	1698 bp	59.60	1.00	103.53
ar11r2_scaffold_63466 Species: Thioalkalivibrio thiocyanoxidans (50%)	2	1486 bp	58.14	1.00	93.47
ar11r2_scaffold_39904 Species: endosymbiont of Tevnia jerichonana (50%)	2	1299 bp	54.35	1.00	99.77
ar11r2_scaffold_31643 Species: Alkalilimnicola ehrlichii (50%)	2	1664 bp	58.35	1.00	100.06
ar11r2_scaffold_43381 Species: Thioalkalivibrio sulfidiphilus (50%)	2	1143 bp	60.54	1.00	100.00
ar11r2_scaffold_16726 Species: Allochromatium vinosum (100%)	2	2835 bp	61.41	1.00	83.81
ar11r2_scaffold_21254 Species: Halothiobacillus neapolitanus (100%)	2	1623 bp	55.33	1.00	93.16
ar11r2_scaffold_29943 Species: RBG_13_Deltaproteobacteria_49_15_curated (50%)	2	1303 bp	63.70	1.00	100.15
ar11r2_scaffold_31163 Species: BJP_IG2103_SUB10_Xanthomonadales_61_45 (50%)	2	1550 bp	55.10	1.00	100.26
ar11r2_scaffold_23616 Species: BJP_IG2102_Gammaproteobacteria_62_140 (50%)	2	1374 bp	54.15	1.00	98.03
ar11r2_scaffold_35412 Species: RBG_16_Gammaproteobacteria_57_12_curated (50%)	2	1514 bp	54.56	1.00	98.28
ar11r2_scaffold_38708 Species: Pantoea sp. PSNIH2 (50%)	2	1118 bp	53.31	1.00	83.18
ar11r2_scaffold_13073 Species: mine drainage metagenome (50%)	2	2555 bp	54.87	1.00	95.93
ar11r2_scaffold_24762 Species: Halothiobacillus neapolitanus (50%)	2	1564 bp	57.61	1.00	98.21
ar11r2_scaffold_17294 Species: Halothiobacillus neapolitanus (50%)	2	1899 bp	52.87	1.00	78.36
ar11r2_scaffold_24914 Species: Thiorhodococcus sp. AK35 (50%)	2	1532 bp	57.77	1.00	100.07
ar11r2_scaffold_30446 Species: Halothiobacillus neapolitanus (50%)	2	1254 bp	55.66	1.00	74.88
ar11r2_scaffold_21381 Species: CG_Beta_01 (50%)	2	1876 bp	54.00	1.00	85.23

Displaying items 351-400 of 453 in total

ALUMROCK_MS11_Chromatiales_related_55_29_curated

ALUMROCK_MS11_Gammaproteobacteria_55_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

ALUMROCK_MS11_Chromatiales_related_55_29_curated

ALUMROCK_MS11_Gammaproteobacteria_55_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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