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ar4r2_scaffold_6540

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6540_1
unknown

Not on your lists

comp(93..776)
DNA (684bp) protein (228aa)

This feature has no annotations

ar4r2_scaffold_6540_2
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists

comp(769..1884)
DNA (1116bp) protein (372aa)
Molybdenum cofactor biosynthesis protein A id=2345684 bin=GWD1_TM7_39_7 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Molybdenum cofactor biosynthesis protein A Tax=GWC2_CPR2_39_35
putative molybdenum cofactor biosynthesis protein A
ar4r2_scaffold_6540_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2439..2684
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQM3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33666.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_6540_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2681..3076
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQM4_9GAMM
PilT domain-containing protein
ar4r2_scaffold_6540_5
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3080..4192
DNA (1113bp) protein (371aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae;
DNA modification methylase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TZR4_9BURK rbh
putative DNA methyltransferase
ar4r2_scaffold_6540_6
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4128..5045)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D4F7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL84346.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
hypothetical protein
ar4r2_scaffold_6540_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5042..5287)
DNA (246bp) protein (82aa)
Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WSJ7_VEREI
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABM60604.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="V
ar4r2_scaffold_6540_8
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5370..5546
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:AFZ07655.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
ar4r2_scaffold_6540_9
unknown

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comp(5559..5795)
DNA (237bp) protein (79aa)

This feature has no annotations

ar4r2_scaffold_6540_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5835..6350)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYW2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36555.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
ar4r2_scaffold_6540_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6372..6548)
DNA (177bp) protein (59aa)
Transferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSY3_9GAMM
Transferase {ECO:0000313|EMBL:EIJ34476.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
carbonic anhydrase
ar4r2_scaffold_6540_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6548..6871)
DNA (324bp) protein (108aa)
Transferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSY3_9GAMM
Transferase {ECO:0000313|EMBL:EIJ34476.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
transferase
ar4r2_scaffold_6540_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6873..7445)
DNA (573bp) protein (191aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYN5_9GAMM
ar4r2_scaffold_6540_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7445..7915)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYN4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36477.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_6540_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7929..9530)
DNA (1602bp) protein (534aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=870187 species="Ba
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYN3_9GAMM rbh
ar4r2_scaffold_6540_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9535..10317)
DNA (783bp) protein (261aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYN2_9GAMM rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
ar4r2_scaffold_6540_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10314..10613)
DNA (300bp) protein (100aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYN1_9GAMM
Displaying 17 items

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