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ar4r2_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_206_1
unknown

Not on your lists

2..127
DNA (126bp) protein (42aa)

This feature has no annotations

ar4r2_scaffold_206_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

405..3491
DNA (3087bp) protein (1029aa)
Secreted protein containing C-terminal beta-propeller domain n=1 Tax=Beggiatoa sp. PS RepID=A7BTH9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD10561.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
secreted protein containing C-terminal beta-propeller domain
ar4r2_scaffold_206_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3687..6566)
DNA (2880bp) protein (960aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEB8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:BAP56676.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
hypothetical protein
ar4r2_scaffold_206_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6569..6925)
DNA (357bp) protein (119aa)
Cyclic nucleotide-binding protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEB7_9GAMM
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:BAP56675.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7642..8565
DNA (924bp) protein (308aa)
TonB domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7C131_9GAMM
TonB domain protein {ECO:0000313|EMBL:EDN67504.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
TonB family protein
ar4r2_scaffold_206_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8576..8941)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEL6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42059.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_206_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9058..9639)
DNA (582bp) protein (194aa)
Putative GTPase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEZ4_9GAMM
GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:BAP55589.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..10210)
DNA (522bp) protein (174aa)
Putative GTPase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEZ2_9GAMM
Putative GTPase {ECO:0000313|EMBL:EIJ42185.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
GTP-binding protein
ar4r2_scaffold_206_9
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10766..13873)
DNA (3108bp) protein (1036aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHX2_9GAMM rbh
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:EGW53651.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
conserved hypothetical protein
ar4r2_scaffold_206_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14401..14619
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Amphritea japonica RepID=UPI0003733859
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14626..15108)
DNA (483bp) protein (161aa)
Protein tyrosine phosphatase {ECO:0000313|EMBL:EDN65413.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EDN65413.1};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Protein tyrosine phosphatase n=1 Tax=Beggiatoa sp. PS RepID=A7C721_9GAMM
protein tyrosine phosphatase
ar4r2_scaffold_206_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15110..15865)
DNA (756bp) protein (252aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDG7_9GAMM
ar4r2_scaffold_206_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15987..16394
DNA (408bp) protein (136aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Beggiatoa sp. PS RepID=A7C2C1_9GAMM
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KHD12821.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
4-hydroxybenzoyl-CoA thioesterase
ar4r2_scaffold_206_14
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..17073
DNA (687bp) protein (229aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Beggiatoa sp. PS RepID=A7C0F8_9GAMM rbh
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDN67730.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
protein TolQ
ar4r2_scaffold_206_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17082..17501
DNA (420bp) protein (140aa)
Biopolymer transport protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXU8_9GAMM
protein TolR
Protein TolR {ECO:0000313|EMBL:BAP55825.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_16
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17507..18763
DNA (1257bp) protein (419aa)
TolA protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTV2_9GAMM
TolA protein
TolA protein {ECO:0000313|EMBL:AGA89421.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
ar4r2_scaffold_206_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18904..22815
DNA (3912bp) protein (1304aa)
ATP-dependent helicase HrpA n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ61_9GAMM rbh
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:BAP54704.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22989..25118)
DNA (2130bp) protein (710aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTT3_9GAMM rbh
sensory transduction histidine kinase
ar4r2_scaffold_206_19
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25225..26541)
DNA (1317bp) protein (439aa)
Extracellular ligand-binding receptor n=1 Tax=Beggiatoa sp. PS RepID=A7BUD9_9GAMM
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EDN69843.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
extracellular ligand-binding receptor
ar4r2_scaffold_206_20
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26604..27470)
DNA (867bp) protein (289aa)
Band 7 protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUE0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE41656.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
Band 7 protein
ar4r2_scaffold_206_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27481..31476)
DNA (3996bp) protein (1332aa)
Long-chain-fatty-acid--(Acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase {ECO:0000313|EMBL:EGW20556.1}; EC=2.3.1.94 {ECO:0000313|EMBL:EGW20556.1};; EC=6.2.1.20 {ECO:0000313|EMBL:EGW20556.1};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
short-chain dehydrogenase/reductase SDR (EC:2.3.1.165) rbh
Long-chain-fatty-acid--(Acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J034_9GAMM
ar4r2_scaffold_206_22
uncultured Acidobacteria bacterium C5, Acidobacteria, Bacteria

Not on your lists

comp(31514..38362)
DNA (6849bp) protein (2283aa)
Polyketide synthase n=1 Tax=uncultured Acidobacteria bacterium C5 RepID=F8TTM7_9BACT rbh
Polyketide synthase {ECO:0000313|EMBL:AEH26538.1}; TaxID=1036856 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium C5.;"
non-ribosomal peptide synthetase/polyketide synthase hybrid enzyme rbh
ar4r2_scaffold_206_23
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38657..39451
DNA (795bp) protein (265aa)
Biotin--protein ligase n=1 Tax=Beggiatoa sp. PS RepID=A7BUM1_9GAMM
Biotin--protein ligase {ECO:0000313|EMBL:EDN69760.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
biotin-(acetyl-CoA carboxylase) ligase
ar4r2_scaffold_206_24
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39448..40206
DNA (759bp) protein (253aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Type III pantothenate kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CCN2_9GAMM
transcriptional regulator
ar4r2_scaffold_206_25
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40203..41177
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCN3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP58200.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_trna_1
unknown

Not on your lists

41352..41422
DNA (71bp)
transferRNA Thr
ar4r2_scaffold_206_26
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41521..41916
DNA (396bp) protein (132aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Beggiatoa alba B18LD RepID=I3CCN4_9GAMM
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:EIJ41377.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
response regulator receiver protein
ar4r2_scaffold_206_27
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41920..42846
DNA (927bp) protein (309aa)
Metal-dependent hydrolase, beta-lactamase superfamily I n=1 Tax=Beggiatoa alba B18LD RepID=I3CCN5_9GAMM rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:BAP58197.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_206_28
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42871..45591)
DNA (2721bp) protein (907aa)
Adenylate cyclase n=1 Tax=Beggiatoa sp. PS RepID=A7BXW8_9GAMM
Adenylate cyclase {ECO:0000313|EMBL:EDN68615.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
family 3 adenylate cyclase
ar4r2_scaffold_206_29
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46072..46641
DNA (570bp) protein (190aa)
Transmembrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4J5_9GAMM
Transmembrane protein {ECO:0000313|EMBL:EDN66289.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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