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AR_MS4_05142019_scaffold_2976

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_2976_1
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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381..3011
DNA (2631bp) protein (877aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003660D23
valS; Valyl-tRNA synthetase
AR_MS4_05142019_scaffold_2976_2
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3046..4119)
DNA (1074bp) protein (358aa)
recombinase RecA n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000367A3FD
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
recA; RecA/RadA recombinase
AR_MS4_05142019_scaffold_2976_3
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(4188..6056)
DNA (1869bp) protein (623aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D12B1
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
AR_MS4_05142019_scaffold_2976_4
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(6111..7868)
DNA (1758bp) protein (586aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003617CC3
dnaG; DNA primase
AR_MS4_05142019_scaffold_2976_5
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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7892..9034
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003664FB8
Uncharacterized protein {ECO:0000313|EMBL:KIE59226.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
AR_MS4_05142019_scaffold_2976_6
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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9031..9813
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035D7656
Pyrophosphatase {ECO:0000313|EMBL:KIE59225.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
mazG; pyrophosphatase
AR_MS4_05142019_scaffold_2976_7
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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9903..10799
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037AFB69
Deacylase {ECO:0000313|EMBL:KIE59224.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
deacylase
AR_MS4_05142019_scaffold_2976_8
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(10717..11571)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036ABAAB
1-acyl-sn-glycerol-3-phosphate acyltransferase (Modular protein) {ECO:0000313|EMBL:CCG91921.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
AR_MS4_05142019_scaffold_2976_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11669..12163
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003645E86
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABM43184.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
AR_MS4_05142019_scaffold_2976_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12249..14006)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000373CE6C
arsenical pump-driving ATPase
Arsenical pump-driving ATPase {ECO:0000313|EMBL:ABP77944.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
AR_MS4_05142019_scaffold_2976_11
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14023..14382)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035EB171
arsenic operon regulator
Arsenic operon regulator {ECO:0000313|EMBL:BAP88814.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
AR_MS4_05142019_scaffold_2976_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(14511..15593)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003600169
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:ACB76947.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_2976_13
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15657..16010
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00038184C6
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EMI19624.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
bacterial regulatory, arsR family protein
AR_MS4_05142019_scaffold_2976_14
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(16043..16708)
DNA (666bp) protein (222aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
leucyl-tRNA--protein transferase n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036328F3
aat; Leu/Phe-tRNA-protein transferase
AR_MS4_05142019_scaffold_2976_15
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(16756..17313)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036E9389
cinA; CinA protein
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Displaying 15 items

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