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BD02T64_scaffold_107

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Displaying items 1-30 of 116 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_107_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..258
DNA (258bp) protein (86aa)
50S ribosomal protein L21 n=1 Tax=Colwellia piezophila RepID=UPI00036F40DD
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwelli
rplU; 50S ribosomal protein L21
BD02T64_scaffold_107_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


274..531
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL27_COLP3
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
BD02T64_scaffold_107_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

680..1840
DNA (1161bp) protein (387aa)
GTPase CgtA n=1 Tax=Colwellia piezophila RepID=UPI0003791FCE
obgE; GTPase ObgE
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
BD02T64_scaffold_107_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1949..2449
DNA (501bp) protein (167aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliacea
Dihydrofolate reductase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VL9_COLP3
BD02T64_scaffold_107_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2439..3989
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036071A8
Na+/H+ antiporter NhaC-like protein {ECO:0000313|EMBL:KGJ95901.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
Na+/H+ antiporter NhaC
BD02T64_scaffold_107_6
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4102..5538)
DNA (1437bp) protein (479aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
glutamate synthase subunit beta n=1 Tax=Colwellia piezophila RepID=UPI000360295B
Glutamate synthase {ECO:0000313|EMBL:KJE40012.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum
BD02T64_scaffold_107_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5571..10031)
DNA (4461bp) protein (1487aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:KGJ91284.1}; EC=1.4.7.1 {ECO:0000313|EMBL:KGJ91284.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwellia
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
glutamate synthase subunit alpha n=1 Tax=Colwellia piezophila RepID=UPI00035D41DF
BD02T64_scaffold_107_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10493..11416)
DNA (924bp) protein (308aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwell
GTP cyclohydrolase n=1 Tax=Colwellia piezophila RepID=UPI00037E32C3
GTP cyclohydrolase
BD02T64_scaffold_107_9
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11605..13251)
DNA (1647bp) protein (549aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1JEH0_9GAMM rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ERG19766.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" s
chemotaxis protein
BD02T64_scaffold_107_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13401..13757
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000370487C
Hpt domain protein {ECO:0000313|EMBL:KGJ95251.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vi
histidine-containing phosphotransfer domain-containing protein
BD02T64_scaffold_107_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13770..14477)
DNA (708bp) protein (236aa)
Aerobic respiration control protein ArcA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VM8_COLP3
arcA; two-component response regulator
Aerobic respiration control protein ArcA {ECO:0000313|EMBL:AAZ24417.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_107_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14577..16211)
DNA (1635bp) protein (545aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
Sensory box sensor histidine kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VM9_COLP3
sensory box sensor histidine kinase
BD02T64_scaffold_107_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..17405)
DNA (1146bp) protein (382aa)
rsmC; ribosomal RNA small subunit methyltransferase C (EC:2.1.1.52)
Ribosomal RNA small subunit methyltransferase C {ECO:0000255|HAMAP-Rule:MF_01862}; EC=2.1.1.172 {ECO:0000255|HAMAP-Rule:MF_01862};; 16S rRNA m2G1207 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01862}
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RSMC_COLP3
BD02T64_scaffold_107_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17882..18871
DNA (990bp) protein (330aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Pseudoalteromonas haloplanktis (strain TAC 125) RepID=Q3IJ34_PSEHT
BD02T64_scaffold_107_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18868..19617
DNA (750bp) protein (250aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:KGJ91278.1}; EC=2.3.1.117 {ECO:0000313|EMBL:KGJ91278.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaprote
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Colwellia piezophila RepID=UPI0003737EEB
BD02T64_scaffold_107_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19623..20846
DNA (1224bp) protein (408aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:KGJ91277.1}; EC=4.1.1.20 {ECO:0000313|EMBL:KGJ91277.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
Putative pyridoxal-dependent decarboxylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN2_COLP3
pyridoxal-dependent decarboxylase
BD02T64_scaffold_107_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20862..21992
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN3_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27278.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_107_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22075..22401
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003691020
Uncharacterized protein {ECO:0000313|EMBL:KGJ95259.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
BD02T64_scaffold_107_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22482..24977
DNA (2496bp) protein (832aa)
TonB-dependent receptor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN6_COLP3
TonB-dependent receptor plug {ECO:0000313|EMBL:KGJ95260.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="
TonB-dependent receptor
BD02T64_scaffold_107_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25018..25578
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003664AFE
Uncharacterized protein {ECO:0000313|EMBL:KGJ89266.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
tellurite resistance protein
BD02T64_scaffold_107_21
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25921..28023)
DNA (2103bp) protein (701aa)
TonB-dependent receptor n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M8I2_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY64154.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
BD02T64_scaffold_107_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28115..28972)
DNA (858bp) protein (286aa)
GntR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI0003747F59
Uncharacterized protein {ECO:0000313|EMBL:KGJ91272.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_107_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29045..29503)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Halomonas zhanjiangensis RepID=UPI000373CE7F
Uncharacterized protein {ECO:0000313|EMBL:KJE40023.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
Tellurite resistance TerB
BD02T64_scaffold_107_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29859..31073
DNA (1215bp) protein (405aa)
RND transporter n=1 Tax=Colwellia piezophila RepID=UPI0003794884
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGJ95262.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwel
RND family efflux transporter MFP subunit
BD02T64_scaffold_107_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31076..34306
DNA (3231bp) protein (1077aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VP1_COLP3
Acriflavin resistance protein {ECO:0000313|EMBL:KGJ91270.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
AcrB/AcrD/AcrF family protein
BD02T64_scaffold_107_26
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34433..36781
DNA (2349bp) protein (783aa)
PPE-repeat protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS22_SHESH
PPE repeat-containing protein
PPE-repeat protein {ECO:0000313|EMBL:ABV35645.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewane
BD02T64_scaffold_107_27
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36796..37185
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS21_SHESH
Uncharacterized protein {ECO:0000313|EMBL:KJE43859.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_107_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37195..39324)
DNA (2130bp) protein (710aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C3CE3
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:KGJ89041.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
winged helix family two component response transcriptional regulator
BD02T64_scaffold_107_29
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39623..42661
DNA (3039bp) protein (1013aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000372454F rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACA86544.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
TonB-dependent receptor rbh
BD02T64_scaffold_107_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42838..44010
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381BA6B
Metallophosphoesterase {ECO:0000313|EMBL:KGJ88322.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
metallophosphoesterase
Displaying items 1-30 of 116 in total

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