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BD02T64_scaffold_179

Search features with annotation key words

Displaying items 121-139 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_179_121
unknown

Not on your lists

comp(138061..138621)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

Signal peptide, extracellular prediction by Interpro Jill Banfield (7/26/16)
BD02T64_scaffold_179_122
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139298..140611
-----------------
DNA (1314bp)
protein (438aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036EC0FB
Sulfatase {ECO:0000313|EMBL:KGJ92608.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
arylsulfatase A family protein
These break down sulfatides, namely cerebroside 3-sulfate into cerebroside and sulfate Jill Banfield (8/19/16)
BD02T64_scaffold_179_123
unknown

Not on your lists

140770..141453
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

No domains Jill Banfield (8/19/16)
BD02T64_scaffold_179_124
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(141702..143261)
-----------------
DNA (1560bp)
protein (520aa)
Glycoside hydrolase, family 29, subgroup {ECO:0000313|EMBL:EMI47174.1}; EC=3.2.1.51 {ECO:0000313|EMBL:EMI47174.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Pl
Glycoside hydrolase, family 29, subgroup n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TDG8_9PLAN rbh
alpha-L-fucosidase
BD02T64_scaffold_179_125
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(143482..144681)
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J313_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:EES72598.1}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str.
hypothetical protein
BD02T64_scaffold_179_126
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(144821..146350)
-----------------
DNA (1530bp)
protein (510aa)
fucA1; alpha-L-fucosidase (EC:3.2.1.51)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037BB3EB
Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) {ECO:0000313|EMBL:EDM29582.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphae
Glycan degradation Jill Banfield (8/19/16)
BD02T64_scaffold_179_127
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146555..147655
-----------------
DNA (1101bp)
protein (367aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6YGL8_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC31864.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
mandelate racemase/muconate lactonizing protein
BD02T64_scaffold_179_128
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147682..148713
-----------------
DNA (1032bp)
protein (344aa)
molecular chaperone GroES n=1 Tax=Pseudoalteromonas haloplanktis RepID=UPI0002F96E7C rbh
Dehydrogenase {ECO:0000313|EMBL:EIK45886.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
Alcohol dehydrogenase GroES-like protein rbh
BD02T64_scaffold_179_129
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148713..149480
-----------------
DNA (768bp)
protein (256aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIK45887.1}; EC=1.1.1.125 {ECO:0000313|EMBL:EIK45887.1};; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadale
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cellvibrio sp. BR RepID=I3ICV2_9GAMM
2-deoxy-D-gluconate 3-dehydrogenase
Pentose and glucuronate interconversions Jill Banfield (8/19/16)
BD02T64_scaffold_179_130
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149483..150934
-----------------
DNA (1452bp)
protein (484aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:EIK45888.1}; EC=1.2.1.22 {ECO:0000313|EMBL:EIK45888.1};; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
aldehyde dehydrogenase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558A7D rbh
betaine-aldehyde dehydrogenase rbh
Betaine aldehyde -> betaine Jill Banfield (8/19/16)
BD02T64_scaffold_179_131
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151013..151621
-----------------
DNA (609bp)
protein (203aa)
GntR family transcriptional regulator n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558A7C rbh
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABD81903.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="
BD02T64_scaffold_179_132
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151974..153047)
-----------------
DNA (1074bp)
protein (358aa)
Adenosine monophosphate-protein transferase {ECO:0000256|PIRNR:PIRNR038925}; EC=2.7.7.n1 {ECO:0000256|PIRNR:PIRNR038925};; AMPylator {ECO:0000256|PIRNR:PIRNR038925}; TaxID=1238 species="Bacteria; Prot
Fic/DOC family protein n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4THP6_PISSA rbh
filamentation induced by cAMP protein fic
BD02T64_scaffold_179_133
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153490..153675)
-----------------
DNA (186bp)
protein (62aa)
Two-component response regulator n=1 Tax=Arcobacter sp. L RepID=G2HWL2_9PROT
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAK73515.1}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arco
BD02T64_scaffold_179_134
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153668..154507)
-----------------
DNA (840bp)
protein (280aa)
phosphohydrolase n=1 Tax=Methylovulum miyakonense RepID=UPI00036BD087
response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:CCE24325.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococc
BD02T64_scaffold_179_135
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(154547..156952)
-----------------
DNA (2406bp)
protein (802aa)
Two-component sensor kinase id=4157168 bin=GWF2_WWE1_40_14 species=Arcobacter sp. L genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
two-component sensor kinase Tax=GWF2_WWE1X_40_14_curated
two-component sensor kinase
BD02T64_scaffold_179_136
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(157101..158294)
-----------------
DNA (1194bp)
protein (398aa)
Putative secreted protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TJW1_9PLAN
Putative secreted protein {ECO:0000313|EMBL:EMI44068.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula s
hypothetical protein
BD02T64_scaffold_179_137
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158524..161496)
-----------------
DNA (2973bp)
protein (991aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Y6I4_9ALTE
TonB-dependent receptor {ECO:0000313|EMBL:KGJ92588.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
TonB-dependent receptor
BD02T64_scaffold_179_138
Vibrio mytili, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161818..163212
-----------------
DNA (1395bp)
protein (465aa)
symporter n=1 Tax=Vibrio gazogenes RepID=UPI000394410D
Symporter YagG {ECO:0000313|EMBL:KIN11289.1}; TaxID=50718 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio mytili.;"
symporter YagG
BD02T64_scaffold_179_139
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

163217..163894
-----------------
DNA (678bp)
protein (226aa)
3,6-anhydro-alpha-L-galactosidase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=F0V1E3_ZOBGA
Beta-xylosidase {ECO:0000313|EMBL:GAF04510.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 955
hypothetical protein
Displaying items 121-139 of 139 in total

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