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BD02T64_scaffold_1178

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1178_1
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18..1319)
DNA (1302bp) protein (434aa)
GGDEF domain protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZFW6_SHEVD
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:BAJ00565.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (str
BD02T64_scaffold_1178_2
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1470..1979)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=Vibrio vulnificus (strain CMCP6) RepID=Q8D6C2_VIBVU
acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:KFK55552.1}; TaxID=672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus.;"
BD02T64_scaffold_1178_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2220..3035)
DNA (816bp) protein (272aa)
OmpA family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X28_COLP3
Sortase system OmpA family protein {ECO:0000313|EMBL:KGJ90333.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so
ompA family protein
BD02T64_scaffold_1178_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3268..3984
DNA (717bp) protein (239aa)
DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X30_COLP3
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AAZ24942.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_1178_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3977..6163
DNA (2187bp) protein (729aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Col
Sensor histidine kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X31_COLP3
sensor histidine kinase
BD02T64_scaffold_1178_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6361..6585
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z07_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ86522.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1178_7
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6658..7569)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Glaciecola sp. (strain 4H-3-7+YE-5) RepID=F4AQR3_GLAS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE23049.1}; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola sp. (str
BD02T64_scaffold_1178_8
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7957..9471
DNA (1515bp) protein (505aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AK1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE44691.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
lipoprotein
BD02T64_scaffold_1178_9
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9532..10293)
DNA (762bp) protein (254aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=485447 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N5_COLP3
hypothetical protein
BD02T64_scaffold_1178_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10420..13026
DNA (2607bp) protein (869aa)
TonB-dependent receptor n=1 Tax=Pseudoalteromonas luteoviolacea B = ATCC 29581 RepID=L8D2T7_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:KGJ89929.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
TonB-dependent receptor rbh
BD02T64_scaffold_1178_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13082..13867)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N6_COLP3
Methyltransferase type 11 {ECO:0000313|EMBL:KGJ87612.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
hypothetical protein
BD02T64_scaffold_1178_12
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13935..14765
DNA (831bp) protein (277aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hydroxyacylglutathione hydrolase n=1 Tax=Colwellia piezophila RepID=UPI00037F8C9E
metallo-beta-lactamase
BD02T64_scaffold_1178_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14846..16489
DNA (1644bp) protein (548aa)
Putative membrane-bound lytic murein transglycosylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N8_COLP3
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KGJ89932.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
membrane-bound lytic murein transglycosylase
BD02T64_scaffold_1178_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16600..17097)
DNA (498bp) protein (166aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N9_COLP3
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAZ25637.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
BD02T64_scaffold_1178_15
unknown

Not on your lists

comp(17196..17342)
DNA (147bp) protein (49aa)

This feature has no annotations

BD02T64_scaffold_1178_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17857..19281
DNA (1425bp) protein (475aa)
ccoN; cytochrome c oxidase, cbb3-type, subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AAZ24439.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AAZ24439.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P1_COLP3
BD02T64_scaffold_1178_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19293..19937
DNA (645bp) protein (215aa)
ccoO; cytochrome c oxidase, cbb3-type, subunit II (EC:1.9.3.1)
peptidase S41 n=1 Tax=Colwellia piezophila RepID=UPI000364B2BC
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:KGJ87606.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colw
BD02T64_scaffold_1178_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19947..20147
DNA (201bp) protein (67aa)
ccoQ; cytochrome c oxidase, cbb3-type, CcoQ subunit (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, CcoQ subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P3_COLP3
CcoQ, cytochrome c oxidase, cbb3-type, CcoQ subunit {ECO:0000313|EMBL:KGJ87605.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sour
BD02T64_scaffold_1178_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20140..21111
DNA (972bp) protein (324aa)
ccoP; cytochrome c oxidase, cbb3-type, subunit III (EC:1.9.3.1)
cytochrome CBB3 n=1 Tax=Colwellia piezophila RepID=UPI0003712E69
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
BD02T64_scaffold_1178_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21287..21781
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P5_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27635.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1178_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21819..24242
DNA (2424bp) protein (808aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KGJ87602.1}; EC=3.6.3.4 {ECO:0000313|EMBL:KGJ87602.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
copper-translocating P-type ATPase (EC:3.6.3.4)
Copper-translocating P-type ATPase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P6_COLP3
BD02T64_scaffold_1178_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24262..24474
DNA (213bp) protein (71aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P7_COLP3
cytochrome oxidase maturation protein, cbb3-type
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:KGJ89941.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
BD02T64_scaffold_1178_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24483..25205
DNA (723bp) protein (241aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ89942.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_1178_24
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25523..25732
DNA (210bp) protein (70aa)
fumarate/nitrate reduction transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI000366EF68
Transcriptional regulator {ECO:0000313|EMBL:KJE47228.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas vir
fnr; fumarate/nitrate reduction transcriptional regulator
BD02T64_scaffold_1178_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25942..26892
DNA (951bp) protein (317aa)
Universal stress protein family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483Q0_COLP3
UspA domain-containing protein {ECO:0000313|EMBL:KGJ89944.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychre
universal stress protein UspE
BD02T64_scaffold_1178_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27014..27928
DNA (915bp) protein (305aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=TTCA_COLP3
PP-loop family protein
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sourc
BD02T64_scaffold_1178_27
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27929..30139)
DNA (2211bp) protein (737aa)
Adenylate cyclase n=1 Tax=Glaciecola lipolytica E3 RepID=K6Y8N7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE39730.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
Adenylate cyclase, family 3
BD02T64_scaffold_1178_28
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30139..32358)
DNA (2220bp) protein (740aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=S3BBG8_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE47371.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
cell wall/surface repeat protein
Displaying 28 items

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