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BD02T64_scaffold_3760

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3760_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1047)
DNA (1047bp) protein (349aa)
DNA polymerase III delta subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI13_9GAMM
holA; DNA polymerase III subunit delta
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BD02T64_scaffold_3760_2
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1052..1564)
DNA (513bp) protein (171aa)
Rare lipoprotein B n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KHF3_9GAMM
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma
RplB family lipoprotein
BD02T64_scaffold_3760_3
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1648..4233)
DNA (2586bp) protein (862aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1328313 species="Bacteria; Proteo
leuS; leucyl-tRNA ligase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Catenovulum agarivorans RepID=UPI0002F96121
BD02T64_scaffold_3760_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4326..5858)
DNA (1533bp) protein (511aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
Apolipoprotein N-acyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI17_9GAMM
BD02T64_scaffold_3760_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5923..6765)
DNA (843bp) protein (281aa)
Putative metal ion transporter n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI18_9GAMM
metal ion transporter
Putative metal ion transporter {ECO:0000313|EMBL:CBL44460.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3760_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6789..7298)
DNA (510bp) protein (170aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=316 species="Bacteria; Prote
Endoribonuclease YbeY n=1 Tax=Pseudomonas sp. GM80 RepID=J3DS07_9PSED
rRNA maturation factor
BD02T64_scaffold_3760_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7324..8370)
DNA (1047bp) protein (349aa)
PhoH family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI20_9GAMM rbh
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:CBL44462.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3760_8
unknown

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8626..8838
DNA (213bp) protein (71aa)

This feature has no annotations

BD02T64_scaffold_3760_9
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8936..10264)
DNA (1329bp) protein (443aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=MIAB_ALCBS
(dimethylallyl)adenosine tRNA methylthiotransferase
BD02T64_scaffold_3760_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10456..11250
DNA (795bp) protein (265aa)
Dienelactone hydrolase family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI23_9GAMM
dienelactone hydrolase
Dienelactone hydrolase family protein {ECO:0000313|EMBL:CBL44465.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3760_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11247..13472)
DNA (2226bp) protein (742aa)
Putative endoglycosylceramidase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI24_9GAMM
endoglycosylceramidase
Putative endoglycosylceramidase {ECO:0000313|EMBL:CBL44466.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3760_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13609..14046)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI25_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44467.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3760_13
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..15896)
DNA (1803bp) protein (601aa)
Voltage-gated ClC-type chloride channel clcA n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8W441_MARHY
clcA; chloride channel protein EriC
Voltage-gated ClC-type chloride channel clcA {ECO:0000313|EMBL:CCG94041.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" sou
BD02T64_scaffold_3760_14
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16127..17173
DNA (1047bp) protein (349aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semiald
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B38527
argC; n-acetyl-gamma-glutamyl-phosphate reductase
BD02T64_scaffold_3760_15
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17187..17963
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037C9194 rbh
hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ97614.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
BD02T64_scaffold_3760_16
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17947..18438
DNA (492bp) protein (164aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KG40_9GAMM
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:EGG98663.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium
hypothetical protein
BD02T64_scaffold_3760_17
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18504..18857
DNA (354bp) protein (118aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHE4_NEPCE
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
iron-sulfur cluster insertion protein ErpA
BD02T64_scaffold_3760_18
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18960..20057)
DNA (1098bp) protein (366aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KEX5_9GAMM
BD02T64_scaffold_3760_19
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20100..21464)
DNA (1365bp) protein (455aa)
M23 peptidase domain-containing protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLG7_SIMAS rbh
M23 peptidase domain-containing protein
M23 peptidase domain-containing protein {ECO:0000313|EMBL:AFU99065.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679
BD02T64_scaffold_3760_20
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21748..22956
DNA (1209bp) protein (403aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI28_9GAMM rbh
tyrS; Tyrosyl-tRNA synthetase, class Ib
Displaying 20 items

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