ggKbase home page

BD02T64_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_292_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151..843
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ28_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44820.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_2
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(873..1127)
DNA (255bp) protein (85aa)
sulfurtransferase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288E824
Sulfurtransferase {ECO:0000313|EMBL:KGE79209.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
sulfur transfer protein SirA
BD02T64_scaffold_292_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1168..2436)
DNA (1269bp) protein (423aa)
Major facilitator superfamily protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIZ3_9GAMM
Major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:CBL44785.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_4
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2580..2891
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FWF1_9GAMM
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AJD48595.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Al
BD02T64_scaffold_292_5
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..3984)
DNA (1080bp) protein (360aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rR
23S rRNA methyltransferase n=1 Tax=Marinobacterium stanieri RepID=UPI000255847A
23S rRNA methyltransferase
BD02T64_scaffold_292_6
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4151..5260
DNA (1110bp) protein (370aa)
Two-component system n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1L269_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD32997.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas den
response regulator receiver protein
BD02T64_scaffold_292_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5606..5998)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIZ1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44783.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_8
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6445..7755)
DNA (1311bp) protein (437aa)
Ammonium transporter n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWQ5_9GAMM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
amt; ammonium transporter
BD02T64_scaffold_292_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8269..9699
DNA (1431bp) protein (477aa)
Cytochrome c oxidase, Cbb3-type, subunit I n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIZ0_9GAMM rbh
ccoN; cytochrome c oxidase, Cbb3-type, subunit I rbh
Cytochrome c oxidase, Cbb3-type, subunit I {ECO:0000313|EMBL:CBL44782.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_10
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9711..10325
DNA (615bp) protein (205aa)
peptidase S41 n=1 Tax=Algicola sagamiensis RepID=UPI00037AA6F4
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:ETN92070.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
cbb3-type cytochrome c oxidase subunit II
BD02T64_scaffold_292_11
Halomonas maura, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..10517
DNA (186bp) protein (62aa)
cbb3-type cytochrome oxidase, subunit 3 (EC:1.9.3.1)
CcoQ n=1 Tax=Halomonas maura RepID=Q4U4B2_9GAMM
CcoQ {ECO:0000313|EMBL:AAY40173.1}; TaxID=117606 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas maura.;"
BD02T64_scaffold_292_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10514..11404
DNA (891bp) protein (297aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIY7_9GAMM
ccoP; cytochrome c oxidase cbb3-type subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11676..13115
DNA (1440bp) protein (480aa)
4fe-4s ferredoxin, iron-sulfur binding protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIY6_9GAMM rbh
4Fe-4S ferredoxin rbh
4fe-4s ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:CBL44778.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_14
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13137..13661
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z428_9GAMM
FixH family protein; K09926 hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
BD02T64_scaffold_292_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13664..16198
DNA (2535bp) protein (845aa)
Cation transport ATPase, E1-E2 family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIY4_9GAMM
Cation transport ATPase, E1-E2 family
Cation transport ATPase, E1-E2 family {ECO:0000313|EMBL:CBL44776.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_16

Not on your lists

16195..16386
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000365793C rbh
Marine sediment metagenome DNA, contig: S01H4_S05447 {ECO:0000313|EMBL:GAH04748.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cbb3-type cytochrome oxidase maturation protein
BD02T64_scaffold_292_17
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16398..17195
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIY2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH45530.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
BD02T64_scaffold_292_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17221..18411
DNA (1191bp) protein (397aa)
Phospholipase D family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIX8_9GAMM
phospholipase D
Phospholipase D family protein {ECO:0000313|EMBL:CBL44770.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_19
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18480..19460)
DNA (981bp) protein (327aa)
Alpha-L-glutamate ligase-related protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YQX6_OLEAN rbh
Alpha-L-glutamate ligase-related protein {ECO:0000313|EMBL:CCK75678.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctic
hypothetical protein
BD02T64_scaffold_292_20
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19464..20972)
DNA (1509bp) protein (503aa)
Gonadoliberin III-related protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YLR9_OLEAN rbh
Gonadoliberin III-related protein {ECO:0000313|EMBL:CCK75677.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.
gonadoliberin III-like protein
BD02T64_scaffold_292_21
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21010..21789)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YLL2_OLEAN rbh
Uncharacterized protein {ECO:0000313|EMBL:CCK75676.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
hypothetical protein
BD02T64_scaffold_292_22
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22274..22930)
DNA (657bp) protein (219aa)
FOG: TPR repeat n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7X3_HAHCH rbh
hypothetical protein
FOG: TPR repeat {ECO:0000313|EMBL:ABC33251.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2
BD02T64_scaffold_292_23
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22990..23826)
DNA (837bp) protein (279aa)
Short-chain alcohol dehydrogenase-like protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7X4_HAHCH rbh
short chain dehydrogenase
Short-chain alcohol dehydrogenase-like protein {ECO:0000313|EMBL:ABC33250.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Ha
BD02T64_scaffold_292_24
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23816..24484)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7X5_HAHCH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC33249.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
BD02T64_scaffold_292_25
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24635..26251)
DNA (1617bp) protein (539aa)
Long-chain acyl-CoA synthetases (AMP-forming) n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7X6_HAHCH rbh
long-chain acyl-CoA synthetase-like protein
Long-chain acyl-CoA synthetases (AMP-forming) {ECO:0000313|EMBL:ABC33248.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hah
BD02T64_scaffold_292_26
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26253..27011)
DNA (759bp) protein (253aa)
Uncharacterized protein involved in outer membrane biogenesis n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7X7_HAHCH
hypothetical protein
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:ABC33247.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahell
BD02T64_scaffold_292_27
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27237..27779
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3ICA2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK45687.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.
hypothetical protein
BD02T64_scaffold_292_28
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27794..29005)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ88_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44880.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_29
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29153..30373)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ87_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44879.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_292_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30610..31470)
DNA (861bp) protein (287aa)
Thioredoxin n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ86_9GAMM
thioredoxin
Thioredoxin {ECO:0000313|EMBL:CBL44878.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 1-30 of 73 in total

View Taxonomy