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This organism can only be binned in the context of its binning project 08E140C01_Z5_2013_IG3399. Please contact the project owner (amano.yuki@jaea.go.jp) to become a member and gain access.

BD02T64_scaffold_484

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_484_1
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..641)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IA19_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK44904.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.
hypothetical protein
BD02T64_scaffold_484_2
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

820..2535
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037197D4
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:ABC27647.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis
BD02T64_scaffold_484_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2612..3307
DNA (696bp) protein (232aa)
Predicted NUDIX hydrolase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLL2_9GAMM
NUDIX hydrolase
Predicted NUDIX hydrolase {ECO:0000313|EMBL:CBL45704.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3719..4252
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJF4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44946.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..7312)
DNA (2973bp) protein (991aa)
Peptidase m16-like n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJF6_9GAMM
peptidase m16-like
Peptidase m16-like {ECO:0000313|EMBL:CBL44948.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7510..8196
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJF8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44950.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8224..9402
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCN4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW31553.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
putative carnitine dehydratase/acyl-CoA transferases-related (COG1804)
BD02T64_scaffold_484_8
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9411..10337)
DNA (927bp) protein (309aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA17_DESAA
alpha/beta hydrolase
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ACL03113.1}; Flags: Precursor;; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
BD02T64_scaffold_484_9
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..11513
DNA (984bp) protein (328aa)
AraC family transcriptional regulator n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XCJ7_9ALTE
AraC family transcriptional regulator {ECO:0000313|EMBL:GAC18344.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="P
AraC family transcriptional regulator
BD02T64_scaffold_484_10
unknown

Not on your lists

comp(11548..12483)
DNA (936bp) protein (312aa)

This feature has no annotations

BD02T64_scaffold_484_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12699..13349)
DNA (651bp) protein (217aa)
Transcriptional regulatory protein, Crp family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG3_9GAMM rbh
transcriptional regulatory protein, Crp family rbh
Transcriptional regulatory protein, Crp family {ECO:0000313|EMBL:CBL44955.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13525..14340
DNA (816bp) protein (272aa)
exonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Pseudomonas fluorescens R124 RepID=K0WR95_PSEFL rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EJZ57644.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
BD02T64_scaffold_484_13
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14337..16865
DNA (2529bp) protein (843aa)
polB; DNA polymerase II (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahell
DNA polymerase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SLR0_HAHCH
BD02T64_scaffold_484_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16837..17730)
DNA (894bp) protein (298aa)
Acyl-CoA thiolesterase II n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG4_9GAMM
tesB; acyl-CoA thiolesterase
Acyl-CoA thiolesterase II {ECO:0000313|EMBL:CBL44956.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_15
unknown

Not on your lists

comp(17824..18711)
DNA (888bp) protein (296aa)

This feature has no annotations

BD02T64_scaffold_484_16
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

19081..19860
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036B1469 rbh
hypothetical protein Tax=GWD1_Spirochaetes_27_9_curated
hypothetical protein
BD02T64_scaffold_484_17
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19943..22090)
DNA (2148bp) protein (716aa)
Membrane protein, transporter-related n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG5_9GAMM
membrane protein, transporter-related
Membrane protein, transporter-related {ECO:0000313|EMBL:CBL44957.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22192..23223)
DNA (1032bp) protein (344aa)
RND type efflux pump involved in aminoglycoside resistance n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG6_9GAMM
adeT; RND type efflux pump involved in aminoglycoside resistance
RND type efflux pump involved in aminoglycoside resistance {ECO:0000313|EMBL:CBL44958.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23341..24387)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44959.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_20
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24820..26967
DNA (2148bp) protein (716aa)
ATP-dependent DNA helicase DinG n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037749D2
dinG; ATP-dependent DNA helicase DinG
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:AFU98377.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13
BD02T64_scaffold_484_21
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27048..27827)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037B59B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE56232.1}; Flags: Precursor;; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_484_22
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28096..29613
DNA (1518bp) protein (506aa)
Methyl-accepting chemotaxis protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7M3_9ALTE
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EBA01360.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marin
chemotaxis sensory transducer
BD02T64_scaffold_484_23
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29743..30501)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3N0_9GAMM
Nucleoside-binding outer membrane protein {ECO:0000313|EMBL:KEA62194.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" sou
hypothetical protein
BD02T64_scaffold_484_24
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(30580..31323)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12M12_SHEDO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
hypothetical protein
BD02T64_scaffold_484_25
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31500..32210)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WAE5_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF73964.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hon
BD02T64_scaffold_484_26
unknown

Not on your lists

comp(32211..32540)
DNA (330bp) protein (110aa)

This feature has no annotations

BD02T64_scaffold_484_27
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32582..33529)
DNA (948bp) protein (316aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinoba
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000365D42D
tRNA-dihydrouridine synthase C
BD02T64_scaffold_484_28
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34028..36256
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFJ3_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47345.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_29
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36346..36669)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47063.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_484_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36842..37447)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJG9_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL44961.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 1-30 of 61 in total

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