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BD02T64_scaffold_850

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_850_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..885)
DNA (582bp) protein (194aa)
pgsA2; CDP-diaglycerol-glycerol-3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diaglycerol-glycerol-3-phosphatidyltransferase {ECO:0000313|EMBL:CBL47035.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBL47035.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" sourc
CDP-diaglycerol-glycerol-3-phosphatidyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQE3_9GAMM rbh
BD02T64_scaffold_850_2
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(988..2748)
DNA (1761bp) protein (587aa)
UvrABC system protein C n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VJN8_9PSED
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
BD02T64_scaffold_850_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2830..3486)
DNA (657bp) protein (219aa)
DNA-binding response regulator n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQE1_9GAMM rbh
gacA; DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:CBL47033.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_850_4
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3819..3998
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:ENY72095.1}; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas diversa 2478-
BD02T64_scaffold_850_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4017..5792)
DNA (1776bp) protein (592aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964, ECO:0000313|EMBL:CCE24697.1};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF
RNA helicase n=1 Tax=Methylomicrobium buryatense RepID=UPI0003488455
deaD; Cold-shock DEAD box protein A-like protein
BD02T64_scaffold_850_6
Chelonobacter oris, Chelonobacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6000..6281
DNA (282bp) protein (94aa)
UPF0345 protein TERTU_1859 n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=Y1859_TERTT
UPF0345 protein OA57_05735 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=505317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Chelonobacter.;" source="Chelonobact
hypothetical protein
BD02T64_scaffold_850_7
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6813..7559
DNA (747bp) protein (249aa)
Uncharacterized protein family UPF0005, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUF6_9GAMM
Uncharacterized protein family UPF0005, putative {ECO:0000313|EMBL:EEB79632.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma prote
hypothetical protein
BD02T64_scaffold_850_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..8025
DNA (393bp) protein (131aa)
Intracellular sulfur oxidation protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK26_9GAMM
dsrE; Intracellular sulfur oxidation protein
Intracellular sulfur oxidation protein {ECO:0000313|EMBL:CBL45168.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_850_9
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8027..8398
DNA (372bp) protein (124aa)
DsrE family protein n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WYF6_HALHL
DsrE family protein
DsrE family protein {ECO:0000313|EMBL:ABM62718.1}; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira h
BD02T64_scaffold_850_10

Not on your lists

8410..8697
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO10567.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_850_11
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8688..9035
DNA (348bp) protein (116aa)
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bact
hypothetical protein n=1 Tax=Halomonas jeotgali RepID=UPI0003469E2A
TusE/DsrC/DsvC family sulfur relay protein
BD02T64_scaffold_850_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9162..10055
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B2E692
glycosyl transferase family protein
Glycosyl transferase, family 3-like protein {ECO:0000313|EMBL:CCE24808.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;"
BD02T64_scaffold_850_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10132..11751)
DNA (1620bp) protein (540aa)
Methyl-accepting chemotaxis protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK22_9GAMM rbh
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL45164.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_850_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11832..13229)
DNA (1398bp) protein (466aa)
Siroheme synthase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK21_9GAMM rbh
cysG; Uroporphyrin-III methylase, involved in siroheme cofactor synthesis for assimilatory nitrite reductase
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_850_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13255..14535)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK20_9GAMM
serS; seryl-tRNA synthetase
BD02T64_scaffold_850_16
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14646..15041)
DNA (396bp) protein (132aa)
Putative fluoride ion transporter CrcB n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4I0M0_9GAMM
crcB-like protein; K06199 CrcB protein Tax=CG_Mariprof_04
CrcB protein
BD02T64_scaffold_850_17
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15072..16451)
DNA (1380bp) protein (460aa)
ATPase, AAA family domain protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PL40_CELJU
ATPase, AAA family domain-containing protein
ATPase, AAA family domain protein {ECO:0000313|EMBL:ACE84341.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibri
BD02T64_scaffold_850_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16452..17117)
DNA (666bp) protein (222aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK17_9GAMM
lolA; Outer-membrane lipoprotein carrier protein
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" so
BD02T64_scaffold_850_19
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17140..19467)
DNA (2328bp) protein (776aa)
FtsK/SpoIIIE family, putative n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CF44_ALCDB
DNA translocase FtsK {ECO:0000313|EMBL:KGD65883.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19
ftsK; FtsK/SpoIIIE family
BD02T64_scaffold_850_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19610..20677)
DNA (1068bp) protein (356aa)
Alanine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W730_9GAMM
alanine dehydrogenase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BD02T64_scaffold_850_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20890..21840
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcace
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IR89_9GAMM
BD02T64_scaffold_850_22
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21938..22648
DNA (711bp) protein (237aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyltransferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=LFTR_SACD2 rbh
BD02T64_scaffold_850_23
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22767..23495
DNA (729bp) protein (243aa)
ate; arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK13_9GAMM rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
BD02T64_scaffold_850_24
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23702..23920
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1551D
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
translation initiation factor IF-1
BD02T64_scaffold_850_25
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24038..26299)
DNA (2262bp) protein (754aa)
ATP-dependent clp protease, ATP-binding subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK11_9GAMM
ATP-dependent clp protease, ATP-binding subunit {ECO:0000313|EMBL:CBL45153.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
clpA; ATP-dependent clp protease, ATP-binding subunit
BD02T64_scaffold_850_26
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26387..26752)
DNA (366bp) protein (122aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK10_9GAMM
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
clpS; ATP-dependent Clp protease adaptor protein
BD02T64_scaffold_850_27
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27040..27369
DNA (330bp) protein (110aa)
Cold-shock protein CspD n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK09_9GAMM
cspD; cold-shock protein CspD
Cold-shock protein CspD {ECO:0000313|EMBL:CBL45151.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_850_28
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27557..28240
DNA (684bp) protein (228aa)
Pseudouridine synthase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK07_9GAMM rbh
pseudouridine synthase family protein Tax=RBG_16_Gammaproteobacteria_57_12_curated
pseudouridine synthase
BD02T64_scaffold_850_29
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28247..28741)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003685F2A
moaE; molybdopterin converting factor subunit 2
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:AHG42443.1}; TaxID=1357279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseud
BD02T64_scaffold_850_30
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28704..28955)
DNA (252bp) protein (84aa)
Molybdopterin converting factor, subunit 1 n=1 Tax=Osedax symbiont Rs1 RepID=S6GFG7_9GAMM
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.
moaD; molybdenum cofactor biosynthesis protein D
Displaying items 1-30 of 42 in total

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