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BD02T64_scaffold_2316

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2316_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

386..1144
DNA (759bp) protein (253aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=83406 species="Bacteria; Proteobacteria; Gammapro
Peptidyl-prolyl cis-trans isomerase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQT0_9GAMM
FKBP-type peptidylprolyl isomerase
BD02T64_scaffold_2316_2
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1201..2202)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XH58_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO81046.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
WD40 repeat-containing protein
BD02T64_scaffold_2316_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2278..2754)
DNA (477bp) protein (159aa)
Regulator of sigma D n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS9_9GAMM
Regulator of sigma D
Regulator of sigma D {ECO:0000313|EMBL:CBL47171.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_4
unknown

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2809..2967
DNA (159bp) protein (53aa)

This feature has no annotations

BD02T64_scaffold_2316_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3082..3579)
DNA (498bp) protein (166aa)
Disulfide bond formation protein B n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS8_9GAMM rbh
dsbB; Disulfide bond formation protein
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;"
BD02T64_scaffold_2316_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3935..4153)
DNA (219bp) protein (73aa)
Ribosome modulation factor-related protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS7_9GAMM
ribosome modulation factor-related protein
Ribosome modulation factor-related protein {ECO:0000313|EMBL:CBL47169.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_7
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4383..5981)
DNA (1599bp) protein (533aa)
gshA; glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_00578}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_00578};; Gamma-ECS {ECO:0000255|HAMAP-Rule:MF_00578}; Short=GCS {ECO:0000255|HAMAP-Rule:MF_00578};;
Glutamate--cysteine ligase n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=GSH1_ALCBS
BD02T64_scaffold_2316_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6172..8523)
DNA (2352bp) protein (784aa)
Predicted transcriptional accessory protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX2_9GAMM rbh
transcriptional accessory protein
Predicted transcriptional accessory protein {ECO:0000313|EMBL:CBL43714.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8649..10871)
DNA (2223bp) protein (741aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SL63_HAHCH
Thymidine phosphorylase {ECO:0000313|EMBL:KJH83265.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
hypothetical protein
BD02T64_scaffold_2316_10
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11046..13211)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8AYS9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EON91484.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lip
thymidine phosphorylase
BD02T64_scaffold_2316_11
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13341..16451)
DNA (3111bp) protein (1037aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000362D8C9 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EAR59786.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariens
cation multi-drug efflux protein
BD02T64_scaffold_2316_12
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16448..17764)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000380ED8E
Secretion protein HlyD {ECO:0000313|EMBL:EAR59787.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
RND family efflux transporter MFP subunit
BD02T64_scaffold_2316_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18059..18808
DNA (750bp) protein (250aa)
Two-component transcriptional regulatory protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX3_9GAMM rbh
ompR; two-component transcriptional regulatory protein rbh
Two-component transcriptional regulatory protein {ECO:0000313|EMBL:CBL43715.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18997..20301
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1
Sensory histidine kinase in two-component regulatory system with OmpR n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX4_9GAMM
envZ; Sensory histidine kinase in two-component regulatory system with OmpR
BD02T64_scaffold_2316_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20401..21090)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC42790.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
BD02T64_scaffold_2316_16
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21168..21776)
DNA (609bp) protein (203aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3VVH3_9LEPT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EPG68039.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar K
putative transcriptional regulator, Crp/Fnr family
BD02T64_scaffold_2316_17
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21796..23076)
DNA (1281bp) protein (427aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rR
Ribosomal RNA large subunit methyltransferase G n=1 Tax=Osedax symbiont Rs2 RepID=S6I0B4_9GAMM
hypothetical protein
BD02T64_scaffold_2316_18
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23114..24793)
DNA (1680bp) protein (560aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WD86_9GAMM
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
BD02T64_scaffold_2316_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25109..26008)
DNA (900bp) protein (300aa)
33 kDa chaperonin n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKZ0_9GAMM
hslO; Chaperone, heat shock 33 family protein
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=83406 species="Bacteria; Proteobacteria; Gamm
BD02T64_scaffold_2316_20
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26011..26475)
DNA (465bp) protein (155aa)
ribosome-associated heat shock protein Hsp15 n=1 Tax=Vibrio campbellii RepID=UPI00026C50CC rbh
heat shock protein
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii.;"
BD02T64_scaffold_2316_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26506..27177)
DNA (672bp) protein (224aa)
haloacid dehalogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C63D0
HAD superfamily hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:CBL45484.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27258..27836
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKZ3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45485.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2316_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27836..28270
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY8_9GAMM
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AHG93262.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
BD02T64_scaffold_2316_24
Vibrio sinaloensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28350..29072)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B2EB5F rbh
Uncharacterized protein {ECO:0000313|EMBL:EGA68811.1}; TaxID=945550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sinaloensis DSM 21326.;"
hypothetical protein
BD02T64_scaffold_2316_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29099..29785)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6A41B rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ95734.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_2316_26
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30091..30201)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JB93_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA00842.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
hypothetical protein
BD02T64_scaffold_2316_27
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30579..30854
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K6YYB3_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC17877.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_2316_28
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30937..32469)
DNA (1533bp) protein (511aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B66691
sensor histidine kinase
BD02T64_scaffold_2316_29
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32473..33168)
DNA (696bp) protein (232aa)
PhoB family transcriptional regulator n=1 Tax=Leucothrix mucor RepID=UPI0003B321E8
Response regulator {ECO:0000313|EMBL:GAD03012.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT
two component transcriptional regulator, winged helix family
BD02T64_scaffold_2316_30
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33365..34495
DNA (1131bp) protein (377aa)
Spermidine/putrescine-binding periplasmic protein-like protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KFC8_SHEWM
Uncharacterized protein {ECO:0000313|EMBL:KJE48189.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
spermidine/putrescine-binding periplasmic protein-like protein
Displaying items 1-30 of 32 in total

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