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BD02T64_scaffold_1061

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1061_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

BD02T64_scaffold_1061_2
unknown

Not on your lists

comp(221..403)
DNA (183bp) protein (61aa)

This feature has no annotations

BD02T64_scaffold_1061_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

447..683
DNA (237bp) protein (79aa)
Similar to virulence associated protein VapB n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPI2_9GAMM rbh
virulence associated protein VapB
Similar to virulence associated protein VapB {ECO:0000313|EMBL:CBL46724.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1061_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

683..1078
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPI1_9GAMM rbh
nucleic acid-binding protein
BD02T64_scaffold_1061_5
unknown

Not on your lists

comp(1061..1171)
DNA (111bp) protein (37aa)

This feature has no annotations

BD02T64_scaffold_1061_6
unknown

Not on your lists

comp(1215..1715)
DNA (501bp) protein (167aa)

This feature has no annotations

BD02T64_scaffold_1061_7
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1943..3508)
DNA (1566bp) protein (522aa)
ISPsy5, transposase n=2 Tax=Gammaproteobacteria RepID=I1YFG9_METFJ rbh
ISPsy5, transposase rbh
ISPsy5, transposase {ECO:0000313|EMBL:AFJ01662.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappie
BD02T64_scaffold_1061_8
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3574..3924)
DNA (351bp) protein (117aa)
IS66 Orf2 family protein n=2 Tax=Gammaproteobacteria RepID=I1YFG8_METFJ rbh
IS66 Orf2 family protein
Transposase {ECO:0000313|EMBL:GAC13413.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipolytica
BD02T64_scaffold_1061_9
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3928..4248)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6WY86_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC13414.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
BD02T64_scaffold_1061_10
unknown

Not on your lists

comp(4357..4533)
DNA (177bp) protein (59aa)

This feature has no annotations

BD02T64_scaffold_1061_11

Not on your lists

5129..7318
DNA (2190bp) protein (730aa)
Uncharacterized protein n=7 Tax=Bacillus cereus group RepID=C2P0R2_BACCE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL78643.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1061_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7431..8846)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00035C8D2E rbh
transporter SSS family
Putative transporter, SSS family {ECO:0000313|EMBL:CCE24909.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Met
BD02T64_scaffold_1061_13
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8989..13113)
DNA (4125bp) protein (1375aa)
Large glycoprotein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08R52_STIAD rbh
Large glycoprotein {ECO:0000313|EMBL:ADO70953.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU62956.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacteri
glycoprotein
BD02T64_scaffold_1061_14
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13495..13854)
DNA (360bp) protein (120aa)
Glyoxalase n=1 Tax=Vibrio parahaemolyticus O1:K33 str. CDC_K4557 RepID=S5JCU1_VIBPH rbh
Glyoxalase family protein {ECO:0000313|EMBL:KGM07516.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga t
glyoxalase
BD02T64_scaffold_1061_15

Not on your lists

comp(13918..14259)
DNA (342bp) protein (114aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase archaeal type n=1 Tax=uncultured bacterium F41-01 RepID=I3VIQ5_9BACT rbh
Peptidyl-tRNA hydrolase archaeal type {ECO:0000313|EMBL:AFK79261.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
BD02T64_scaffold_1061_16
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14422..15144)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003776E12
methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
SAM-dependent methyltransferase
BD02T64_scaffold_1061_17

Not on your lists

comp(15128..15481)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XHB2_METNJ
Uncharacterized protein {ECO:0000313|EMBL:KKM64505.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1061_18
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..18619
DNA (2985bp) protein (995aa)
Sensor histidine kinase/response regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GIU1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD48760.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
BD02T64_scaffold_1061_19
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18909..20156
DNA (1248bp) protein (416aa)
Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NS59_9GAMM
Ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:EHQ56975.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteo
Rieske (2Fe-2S) domain-containing protein
BD02T64_scaffold_1061_20
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20255..20422
DNA (168bp) protein (56aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EAW33208.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EAW33208.1};; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="ma
BD02T64_scaffold_1061_21
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20595..21746
DNA (1152bp) protein (384aa)
Fatty acid desaturase family protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U338_9DELT
Fatty acid desaturase family protein {ECO:0000313|EMBL:ERK92374.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" s
fatty acid desaturase family protein
BD02T64_scaffold_1061_22
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21743..24709)
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002D8D6C5
Ferrichrome-iron receptor {ECO:0000313|EMBL:KIJ83903.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
TonB-dependent siderophore receptor
BD02T64_scaffold_1061_23
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24669..25718)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI000314EA48
anti-FecI sigma factor FecR
FecR-like transmembrane sensor {ECO:0000313|EMBL:EKZ96583.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
BD02T64_scaffold_1061_24
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25715..26254)
DNA (540bp) protein (180aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KQS4_SIMAS
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AFV00616.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 2
BD02T64_scaffold_1061_25
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

26603..28237
DNA (1635bp) protein (545aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
Carboxylesterase type B n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRL9_9BACT rbh
hypothetical protein
BD02T64_scaffold_1061_26
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28275..29159
DNA (885bp) protein (295aa)
Uncharacterized HTH-type transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J672_POLGS
HTH-type transcriptional regulator
Uncharacterized HTH-type transcriptional regulator {ECO:0000313|EMBL:ADZ72435.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain
BD02T64_scaffold_1061_27
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29291..29842
DNA (552bp) protein (184aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZP6_NITHN
Phosphoesterase PA-phosphatase {ECO:0000313|EMBL:KHL71015.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibi
PA-phosphatase-like phosphoesterase
BD02T64_scaffold_1061_28
unknown

Not on your lists

comp(29747..29941)
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_1061_29
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30062..31501
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI000318D755
ABC-type phosphate transport system, periplasmic component
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:AJQ95878.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanosp
BD02T64_scaffold_1061_30
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31800..32642
DNA (843bp) protein (281aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SA47_HAHCH
response regulator
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:ABC32477.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; O
Displaying items 1-30 of 39 in total

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