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BD02T64_scaffold_1333

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1333_1
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13..318
DNA (306bp) protein (102aa)
Ribosome-associated protein Y (PSrp-1) n=1 Tax=Bermanella marisrubri RepID=Q1MYM6_9GAMM
Ribosome-associated protein Y (PSrp-1) {ECO:0000313|EMBL:EAT11090.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubr
sigma 54 modulation protein/ribosomal protein S30EA
BD02T64_scaffold_1333_2
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

336..785
DNA (450bp) protein (150aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SBH9_HAHCH
ptsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ABC31995.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hah
BD02T64_scaffold_1333_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

806..1702
DNA (897bp) protein (299aa)
UPF0042 nucleotide-binding protein HDN1F_06290 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC0_9GAMM
hypothetical protein
Nucleotide-binding protein HDN1F_06290 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_4
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1740..2012
DNA (273bp) protein (91aa)
Phosphocarrier protein HPr n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKP1_NEPCE
Phosphocarrier protein HPr {ECO:0000313|EMBL:EAR61056.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.
phosphotransferase system, phosphocarrier protein HPr
BD02T64_scaffold_1333_5
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..3618
DNA (1359bp) protein (453aa)
Magnesium transporter n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B552_9ALTE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacte
magnesium transporter
BD02T64_scaffold_1333_6
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3653..5008)
DNA (1356bp) protein (452aa)
peptidase C69 n=1 Tax=Pseudomonas thermotolerans RepID=UPI000365DAB6
Peptidase PmbA {ECO:0000313|EMBL:KEI73055.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
tldE; protein TldE
BD02T64_scaffold_1333_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5168..5746
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHB6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44208.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_8
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5799..7244)
DNA (1446bp) protein (482aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C5B9_CYCSP
tldD; C69 family peptidase
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:AFT67685.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source=
BD02T64_scaffold_1333_9
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7237..8121)
DNA (885bp) protein (295aa)
Carbon-nitrogen hydrolase n=1 Tax=Marinobacter sp. ES-1 RepID=U7FYD7_9ALTE rbh
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:ERP90594.1}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter s
hydrolase
BD02T64_scaffold_1333_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8124..12326)
DNA (4203bp) protein (1401aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHB4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44206.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12411..13913)
DNA (1503bp) protein (501aa)
Ribonuclease G (RNase G) n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHB3_9GAMM
cafA; ribonuclease G (RNase G)
Ribonuclease G (RNase G) {ECO:0000313|EMBL:CBL44205.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_12
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14008..14607)
DNA (600bp) protein (200aa)
Maf-like protein CJA_2814 n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PC03_CELJU
septum formation protein Maf
Maf-like protein CJA_2814 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja
BD02T64_scaffold_1333_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14594..15076)
DNA (483bp) protein (161aa)
Rod shape-determining protein MreD n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6I2_9GAMM
mreD; Rod shape-determining transmembrane protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BD02T64_scaffold_1333_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15073..15909)
DNA (837bp) protein (279aa)
Cell shape-determining protein MreC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHB0_9GAMM
mreC; Rod shape-determining protein
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" sour
BD02T64_scaffold_1333_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16086..17123)
DNA (1038bp) protein (346aa)
Rod shape-determining protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHA9_9GAMM rbh
mreB; Rod shape-determining protein
Rod shape-determining protein {ECO:0000313|EMBL:CBL44201.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_16
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17422..17709
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHE1_METFJ
BD02T64_scaffold_1333_17
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17800..19257
DNA (1458bp) protein (486aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=754476
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XMK1_METNJ
BD02T64_scaffold_1333_18
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19280..20725
DNA (1446bp) protein (482aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Pseudomonas syringae pv. maculicola str. ES4326 RepID=F3HG30_PSEYM rbh
BD02T64_scaffold_1333_19
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20878..21516)
DNA (639bp) protein (213aa)
2OG-Fe(II) oxygenase n=1 Tax=Osedax symbiont Rs1 RepID=S6HM65_9GAMM
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:EPJ46197.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont
hypothetical protein
BD02T64_scaffold_1333_20
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21548..22336)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000363C170
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:EAR60102.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter
thiF; adenylyltransferase
BD02T64_scaffold_1333_21
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22333..23175)
DNA (843bp) protein (281aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Photobacterium profundum RepID=Q6LNB5_PHOPR
HemK protein, methylase of polypeptide chain release factors
BD02T64_scaffold_1333_22
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23249..24331)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RF1_SACD2
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; A
BD02T64_scaffold_1333_23
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24507..25784)
DNA (1278bp) protein (426aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKV2_9GAMM rbh
BD02T64_scaffold_1333_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26132..27865
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKU6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45438.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1333_25
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..28620
DNA (636bp) protein (212aa)
Outer-membrane lipoprotein LolB n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKU5_9GAMM
lolB; Outer membrane lipoprotein
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium Hd
BD02T64_scaffold_1333_26

Not on your lists

28623..29525
DNA (903bp) protein (301aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A77DE7
Uncharacterized protein {ECO:0000313|EMBL:KKN50614.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
kinase
Displaying 26 items

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