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BD02T64_scaffold_1591

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1591_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17..790)
DNA (774bp) protein (258aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=83406 species="Bacteria; Proteobac
Protein phosphatase CheZ n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJS2_9GAMM rbh
cheZ; chemotaxis phosphatase
BD02T64_scaffold_1591_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(812..1186)
DNA (375bp) protein (125aa)
Chemotaxis protein CheY n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJS1_9GAMM
cheY; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:CBL45063.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1425..2174)
DNA (750bp) protein (250aa)
RNA polymerase sigma factor FliA n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJS0_9GAMM
fliA; RNA polymerase sigma factor for flagellar operon (Sigma-F factor)
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma
BD02T64_scaffold_1591_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2191..3012)
DNA (822bp) protein (274aa)
Site-determining protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJR9_9GAMM
fleN; flagellar number regulator FleN
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3097..4995)
DNA (1899bp) protein (633aa)
Flagellar biosynthetic protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJR8_9GAMM
flhF; flagellar biosynthetic protein
Flagellar biosynthetic protein {ECO:0000313|EMBL:CBL45060.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4998..7124)
DNA (2127bp) protein (709aa)
Flagellar biosynthesis protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJR7_9GAMM
flhA; flagellar biosynthesis protein
Flagellar biosynthesis protein {ECO:0000313|EMBL:CBL45059.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_7
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7243..8376)
DNA (1134bp) protein (378aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Methylomicrobium album BG8 RepID=H8GMV9_METAL
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EIC29511.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="M
flhB; flagellar biosynthesis protein FlhB
BD02T64_scaffold_1591_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8404..9174)
DNA (771bp) protein (257aa)
Flagellar biosynthetic protein fliR n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJR5_9GAMM
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_9
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9184..9453)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000360A502
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:CDF85265.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
BD02T64_scaffold_1591_10
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9510..10271)
DNA (762bp) protein (254aa)
Flagellar biosynthesis protein FliP n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KIB6_SIMAS rbh
fliP; flagellar biosynthesis protein FliP
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:AFU97698.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JC
BD02T64_scaffold_1591_11
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(10264..10878)
DNA (615bp) protein (205aa)
Flagellar biosynthetic protein FliO n=1 Tax=Cedecea davisae DSM 4568 RepID=S3ITU2_9ENTR rbh
flagellar biosynthesis protein FliO
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KGQ03837.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordyc
BD02T64_scaffold_1591_12
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10888..11319)
DNA (432bp) protein (144aa)
flagellar motor switch protein FliN n=1 Tax=Teredinibacter turnerae RepID=UPI00037C88F4 rbh
Flagellar motor switch protein {ECO:0000313|EMBL:KJK00451.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
fliN; flagellar motor switch protein
BD02T64_scaffold_1591_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11444..12508)
DNA (1065bp) protein (355aa)
Flagellar motor switch protein FliM n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJR0_9GAMM rbh
fliM; flagellar motor switch protein
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_14
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12524..13021)
DNA (498bp) protein (166aa)
Flagellar basal body-associated protein FliL n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CV58_PSEST rbh
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:CEG52637.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
fliL; flagellar basal body-associated protein FliL
BD02T64_scaffold_1591_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13423..15570)
DNA (2148bp) protein (716aa)
Similar to flagellar hook-length control protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJQ8_9GAMM
flagellar hook-length control protein
Similar to flagellar hook-length control protein {ECO:0000313|EMBL:CBL45050.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_16
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15706..15969)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJQ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45049.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1591_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16136..16423
DNA (288bp) protein (96aa)
PAAR repeat-containing protein id=2667420 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
PAAR repeat-containing protein Tax=GWC2_Bacteroidetes_46_850_curated
PAAR repeat-containing protein
BD02T64_scaffold_1591_18
unknown

Not on your lists

comp(16499..17401)
DNA (903bp) protein (301aa)

This feature has no annotations

BD02T64_scaffold_1591_19
unknown

Not on your lists

comp(17398..18180)
DNA (783bp) protein (261aa)

This feature has no annotations

BD02T64_scaffold_1591_20
unknown

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comp(18192..18689)
DNA (498bp) protein (166aa)

This feature has no annotations

BD02T64_scaffold_1591_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18689..19855)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8LZT7_PSEAI
Putative transmembrane secretion-related protein {ECO:0000313|EMBL:AGL46076.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
putative transmembrane secretion-related protein
BD02T64_scaffold_1591_22

Not on your lists

comp(19858..20427)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN89549.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_1591_23

Not on your lists

comp(20505..22277)
DNA (1773bp) protein (591aa)
General secretion pathway protein E n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T0X5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN25144.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative pilus assembly-related protein
BD02T64_scaffold_1591_24
unknown

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comp(22281..22778)
DNA (498bp) protein (166aa)

This feature has no annotations

BD02T64_scaffold_1591_25
unknown

Not on your lists

comp(22840..23343)
DNA (504bp) protein (168aa)

This feature has no annotations

BD02T64_scaffold_1591_26
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23307..24197)
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=N2BTP8_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA16940.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
putative transmembrane protein
BD02T64_scaffold_1591_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24201..25712)
DNA (1512bp) protein (504aa)
Putative type II and type III secretion system pilus protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=A4V7Z4_PSEFS
putative type II and type III secretion system pilus protein
Putative type II and type III secretion system pilus protein {ECO:0000313|EMBL:CAM96060.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
Displaying 27 items

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