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BD02T64_scaffold_1931

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1931_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

BD02T64_scaffold_1931_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

379..762
DNA (384bp) protein (128aa)
Type IV pilus response regulator, CheY analog, possibly involved in chemotaxis n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR26_9GAMM rbh
pilG; type IV pilus response regulator, CheY analog, possibly involved in chemotaxis
Type IV pilus response regulator, CheY analog, possibly involved in chemotaxis {ECO:0000313|EMBL:CBL47268.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteo
BD02T64_scaffold_1931_3
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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880..1245
DNA (366bp) protein (122aa)
Response regulator receiver domain protein (CheY) n=1 Tax=Reinekea blandensis MED297 RepID=A4BIS5_9GAMM
Response regulator receiver domain protein (CheY) {ECO:0000313|EMBL:EAR07942.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
pilH; type IV pilus response regulator, CheY analog, possibly involved in chemotaxis
BD02T64_scaffold_1931_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1251..1790
DNA (540bp) protein (180aa)
Twitching motility protein, CheW analog, possibly involved in chemotaxis n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR24_9GAMM
pilI; Twitching motility protein, CheW analog, possibly involved in chemotaxis
Twitching motility protein, CheW analog, possibly involved in chemotaxis {ECO:0000313|EMBL:CBL47266.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacter
BD02T64_scaffold_1931_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2222..4288
DNA (2067bp) protein (689aa)
Type IV pilus biogenesis protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR23_9GAMM rbh
pilJ; type IV pilus biogenesis protein
Type IV pilus biogenesis protein {ECO:0000313|EMBL:CBL47265.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1931_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4310..5182
DNA (873bp) protein (291aa)
Methyltransferase PilK n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR22_9GAMM
pilK; methyltransferase PilK
Methyltransferase PilK {ECO:0000313|EMBL:CBL47264.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1931_7
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5203..11706
DNA (6504bp) protein (2168aa)
Sensor histidine kinase/response regulator n=1 Tax=Oleispira antarctica RB-8 RepID=R4YJK5_OLEAN rbh
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:CCK74270.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarct
sensor histidine kinase/response regulator
BD02T64_scaffold_1931_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11736..12794
DNA (1059bp) protein (353aa)
Protein-glutamate methylesterase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR20_9GAMM
cheB3; protein-glutamate methylesterase
Protein-glutamate methylesterase {ECO:0000313|EMBL:CBL47262.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1931_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12876..13325
DNA (450bp) protein (150aa)
CheW-like protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR19_9GAMM rbh
chemotaxis protein CheW
CheW-like protein {ECO:0000313|EMBL:CBL47261.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1931_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13359..14126)
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" so
Ribosomal RNA small subunit methyltransferase E n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR18_9GAMM
hypothetical protein
BD02T64_scaffold_1931_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14331..14900)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BRX4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN70712.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
BD02T64_scaffold_1931_12
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..15602)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCH8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW31497.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_1931_13
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15691..17304)
DNA (1614bp) protein (538aa)
Transcriptional regulatory protein RtcR n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BLQ3_TERTT
RtcR family transcriptional regulator
Transcriptional regulatory protein RtcR {ECO:0000313|EMBL:ACR10889.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Tere
BD02T64_scaffold_1931_14
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17498..18739
DNA (1242bp) protein (414aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonad
RTCB protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036E2413
RtcB protein
BD02T64_scaffold_1931_15
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18767..19834
DNA (1068bp) protein (356aa)
rtcA; RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000379CD48
BD02T64_scaffold_1931_16
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20552..21121
DNA (570bp) protein (190aa)
Restriction endonuclease n=1 Tax=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) RepID=F2GB72_ALTMD rbh
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AJQ97019.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gyn
BD02T64_scaffold_1931_17
unknown

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21202..21411
DNA (210bp) protein (70aa)

This feature has no annotations

BD02T64_scaffold_1931_18
Pseudoalteromonas sp. SCSIO_11900, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21595..22119
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZFW9_SHEVD
Endonuclease {ECO:0000313|EMBL:EWS97251.1}; TaxID=1461766 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromona
hypothetical protein
Displaying 18 items

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