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BD02T64_scaffold_3002

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3002_1
unknown

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3..77
DNA (75bp) protein (25aa)

This feature has no annotations

BD02T64_scaffold_3002_2
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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79..753
DNA (675bp) protein (225aa)
nqrD; Na(+)-translocating NADH-quinone reductase subunit D (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VQR5_ALCBS
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00170009}; Short=Na(+)-NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; Short=Na(+)-translo
BD02T64_scaffold_3002_3
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1379
DNA (609bp) protein (203aa)
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HDN7_PSEAC rbh
nqrE; Na(+)-translocating NADH-quinone reductase subunit E
Tax=BJP_IG2103_Rhodocyclales_63_50
BD02T64_scaffold_3002_4
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1401..2630
DNA (1230bp) protein (410aa)
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJN1_NEPCE
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:00002
NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
BD02T64_scaffold_3002_5
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2663..3730
DNA (1068bp) protein (356aa)
ApbE-like lipoprotein n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QX80_CHRSD
ApbE-like lipoprotein
ApbE-like lipoprotein {ECO:0000313|EMBL:ABE58928.1}; Flags: Precursor;; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" sour
BD02T64_scaffold_3002_6
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3795..4037
DNA (243bp) protein (81aa)
Conserved hypothetical membrane protein DUF539 n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BII8_TERTT
hypothetical protein
Conserved hypothetical membrane protein DUF539 {ECO:0000313|EMBL:ACR12636.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedi
BD02T64_scaffold_3002_7
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4159..5556
DNA (1398bp) protein (466aa)
Soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Soluble pyridine nucleotide transhydrogenase {ECO:0000256|HAMAP-Rule:MF_00247}; Short=STH {ECO:0000256|HAMAP-Rule:MF_00247};; EC=1.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00247};; NAD(P)(+) transhydrogenase
Soluble pyridine nucleotide transhydrogenase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JWQ0_MARM1
BD02T64_scaffold_3002_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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5589..5978
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPZ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46887.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_9
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5995..6684)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Vibrio nigripulchritudo SFn118 RepID=U4G8P5_9VIBR
IMP dehydrogenase/GMP reductase
IMP dehydrogenase/GMP reductase {ECO:0000313|EMBL:AGH81526.1}; TaxID=314282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychrom
BD02T64_scaffold_3002_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6867..7790)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPZ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46888.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_11
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7988..8536
DNA (549bp) protein (183aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XG95_9ALTE
Glutamate synthase {ECO:0000313|EMBL:GAC14682.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipo
ferredoxin-dependent glutamate synthase
BD02T64_scaffold_3002_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8546..9625)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJP3_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45035.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9644..10396)
DNA (753bp) protein (251aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPZ7_9GAMM rbh
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBL46889.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_14
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..10776)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IB94_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKE52072.1}; Flags: Precursor;; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source=
hypothetical protein
BD02T64_scaffold_3002_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10852..11448)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ00_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46892.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_16
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11716..12858
DNA (1143bp) protein (381aa)
Multidrug ABC transporter substrate-binding protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FY21_9GAMM
lolE; lipoprotein ABC transporter inner membrane protein
ABC lipoprotein exporter, inner membrane subunit {ECO:0000313|EMBL:CBL46893.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3002_17
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12851..13573
DNA (723bp) protein (241aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; Ta
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ02_9GAMM
lolD; lipoprotein-releasing system ATP-binding protein LolD
BD02T64_scaffold_3002_18
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13612..14013)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JHV6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE82961.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensi
hypothetical protein
BD02T64_scaffold_3002_19
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14196..16553
DNA (2358bp) protein (786aa)
Competence protein ComA n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C5Y4_9GAMM
Competence protein ComA {ECO:0000313|EMBL:ESS73872.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
DNA internalization-related competence protein ComEC/Rec2
BD02T64_scaffold_3002_20
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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16626..17261
DNA (636bp) protein (212aa)
Biopolymer transport protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YU00_OLEAN
Biopolymer transport protein {ECO:0000313|EMBL:CCK76244.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
biopolymer transporter ExbB
BD02T64_scaffold_3002_21
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17258..17677
DNA (420bp) protein (140aa)
ExbD/TolR family protein n=1 Tax=Cellvibrio sp. BR RepID=I3IC69_9GAMM
ExbD/TolR family protein {ECO:0000313|EMBL:EIK45654.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR
ExbD/TolR family protein
BD02T64_scaffold_3002_22
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17760..18863
DNA (1104bp) protein (368aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
tetraacyldisaccharide 4''''-kinase n=1 Tax=Pseudomonas caeni RepID=UPI0003B55008
tetraacyldisaccharide 4'-kinase
BD02T64_scaffold_3002_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..19688
DNA (762bp) protein (254aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MR15_PSEPS
BD02T64_scaffold_3002_24
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19685..20155
DNA (471bp) protein (157aa)
Low molecular weight protein tyrosine phosphatase (EC:3.1.3.48)
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI85442.1}; EC=3.1.3.48 {ECO:0000313|EMBL:AFI85442.1};; TaxID=754476 species="Bacteria; Proteobacteria; Gammaprote
Low molecular weight protein tyrosine phosphatase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XM23_METNJ
BD02T64_scaffold_3002_25
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20155..21183
DNA (1029bp) protein (343aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F866B4
UDP-N-acetylenolpyruvoylglucosamine reductase
BD02T64_scaffold_3002_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21388..24321)
DNA (2934bp) protein (978aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=83406 species="Bacteria; Proteobacteria; Gamm
Ribonuclease E n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ10_9GAMM rbh
rne; ribonuclease E (RNase E)
BD02T64_scaffold_3002_27
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25175..26131
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellace
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000364D992
lysozyme
BD02T64_scaffold_3002_28
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26192..26881
DNA (690bp) protein (230aa)
HAD family hydrolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B6AADA
HAD family hydrolase {ECO:0000313|EMBL:KJS04774.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
HAD hydrolase
BD02T64_scaffold_3002_29
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26961..28058
DNA (1098bp) protein (366aa)
Peptidase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GYH6_9GAMM
peptidase, S49 (Protease IV) family protein
Peptidase, S49 (Protease IV) family protein {ECO:0000313|EMBL:AJD48093.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" sour
BD02T64_scaffold_3002_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28174..28839)
DNA (666bp) protein (222aa)
Transcriptional regulator n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ15_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL46907.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying 30 items

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