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BD02T64_scaffold_3610

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3610_1

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1..255
DNA (255bp) protein (85aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYJ9_9BACT rbh
rpoZ; DNA-directed RNA polymerase subunit omega
BD02T64_scaffold_3610_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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401..2512
DNA (2112bp) protein (704aa)
Guanosine-3\',5\'-bis(Diphosphate) 3\'-pyrophosphohydrolase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VGC6_9GAMM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBL43868.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_3
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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2529..2936
DNA (408bp) protein (136aa)
YjgF-like protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YUP6_OLEAN
Endoribonuclease L-PSP {ECO:0000313|EMBL:KHF26492.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
endoribonuclease L-PSP
BD02T64_scaffold_3610_4
unknown

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comp(3037..3465)
DNA (429bp) protein (143aa)

This feature has no annotations

BD02T64_scaffold_3610_5
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3690..4544)
DNA (855bp) protein (285aa)
ActC family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9K6_9GAMM
ActC family protein {ECO:0000313|EMBL:EAW32810.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
oxidoreductase
BD02T64_scaffold_3610_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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4626..5534
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL56_9GAMM
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBL45548.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_7
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5544..7658
DNA (2115bp) protein (705aa)
recG; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPY2_NEPCE
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EAR62749.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesarie
BD02T64_scaffold_3610_8
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7693..8073
DNA (381bp) protein (127aa)
Response regulator receiver n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21PN5_SACD2
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ABD79344.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharopha
BD02T64_scaffold_3610_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8089..9954)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL16_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45508.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10213..11046)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL15_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45507.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11230..11883)
DNA (654bp) protein (218aa)
Thiol:disulfide interchange protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL14_9GAMM rbh
dsbA; thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12059..12667)
DNA (609bp) protein (203aa)
Cytochrome c, class I n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL13_9GAMM rbh
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:CBL45505.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_13
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12830..13126)
DNA (297bp) protein (99aa)
Cytochrome c5 n=1 Tax=Congregibacter litoralis KT71 RepID=A4A914_9GAMM
Cytochrome c5 {ECO:0000313|EMBL:EAQ97556.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
cytochrome c, class I
BD02T64_scaffold_3610_14
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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13368..14093
DNA (726bp) protein (242aa)
Probable GTP-binding protein EngB n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FH88_9GAMM rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia
GTP-binding protein EngB
BD02T64_scaffold_3610_15
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14139..16001
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000380F945
Periplasmic sensor hybrid histidine kinase {ECO:0000313|EMBL:EDM85061.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="
integral membrane sensor hybrid histidine kinase
BD02T64_scaffold_3610_16
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16271..17653)
DNA (1383bp) protein (461aa)
UPF0061 protein Mettu_2963 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J288_9GAMM
UPF0061 protein Mettu_2963 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methyloba
hypothetical protein
BD02T64_scaffold_3610_17
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17991..18371)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558DBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ94054.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
BD02T64_scaffold_3610_18
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18374..21091)
DNA (2718bp) protein (906aa)
polA; DNA polymerase A (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Hahella ganghwensis RepID=UPI000367D92A rbh
DNA polymerase I {ECO:0000313|EMBL:ENO14640.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus
BD02T64_scaffold_3610_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21371..21883)
DNA (513bp) protein (171aa)
Putative glutamate decarboxylase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VG43_9GAMM
glutamate decarboxylase
Putative glutamate decarboxylase {ECO:0000313|EMBL:CBL43785.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_20
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21895..23037)
DNA (1143bp) protein (381aa)
Putative glutamate decarboxylase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VG43_9GAMM
glutamate decarboxylase
Putative glutamate decarboxylase {ECO:0000313|EMBL:CBL43785.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23277..24350)
DNA (1074bp) protein (358aa)
Alpha/beta hydrolase fold-3 protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VG42_9GAMM
alpha/beta hydrolase
Alpha/beta hydrolase fold-3 protein {ECO:0000313|EMBL:CBL43784.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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24566..24853
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VG29_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL43771.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_23
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24847..25809
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQW9_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23540.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylo
hypothetical protein
BD02T64_scaffold_3610_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25800..26744)
DNA (945bp) protein (315aa)
zinc ABC transporter substrate-binding protein n=1 Tax=Vibrio crassostreae RepID=UPI00030E7F96
znuA; high-affinity zinc uptake system protein
High-affinity zinc uptake system protein {ECO:0000313|EMBL:CBL43769.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_25
Pseudomonas sp. GM30, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26895..27677
DNA (783bp) protein (261aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; Flags: Precursor;; TaxID=1144328 species="Bacteria; Proteobacteria; Gammaproteoba
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000376EF9A
zinc ABC transporter ATP-binding protein
BD02T64_scaffold_3610_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27670..28455
DNA (786bp) protein (262aa)
ABC-type Mn2+/Zn2+ transport systems, permease component n=1 Tax=gamma proteobacterium HdN1 RepID=E1VG25_9GAMM
znuB; ABC-type Mn2+/Zn2+ transport systems, permease component
ABC-type Mn2+/Zn2+ transport systems, permease component {ECO:0000313|EMBL:CBL43767.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3610_27
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28539..29468
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DVI4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCU73293.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-
hypothetical protein
BD02T64_scaffold_3610_28
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29472..30866
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B0I3_9ALTE rbh
MATE efflux family protein {ECO:0000313|EMBL:EON92085.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter
dinF; DNA-damage-inducible protein F
BD02T64_scaffold_3610_29
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30884..31135)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PH31_CELJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE85404.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicu
BD02T64_scaffold_3610_30
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31279..33210)
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00036E8E69
Oligopeptidase A {ECO:0000313|EMBL:KEI69666.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.
oligopeptidase A
Displaying items 1-30 of 37 in total

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