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BD02T64_scaffold_3787

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3787_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
Cold-shock DNA-binding domain family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VJ5_COLP3
cspX; cold shock protein
Cold-shock DNA-binding domain family protein {ECO:0000313|EMBL:AAZ24616.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Co
BD02T64_scaffold_3787_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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297..1475
DNA (1179bp) protein (393aa)
Nuclease SbcCD, D subunit n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KLN5_SHEWM rbh
Exonuclease SbcD {ECO:0000313|EMBL:AKH19178.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
nuclease SbcCD subunit D
BD02T64_scaffold_3787_3
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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1479..4643
DNA (3165bp) protein (1055aa)
Putative exonuclease SbcC n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SZI0_META2
Uncharacterized protein {ECO:0000313|EMBL:AKH19179.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
exonuclease SbcC
BD02T64_scaffold_3787_4
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4654..5811)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GI12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD47462.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
BD02T64_scaffold_3787_5
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5933..6541)
DNA (609bp) protein (203aa)
Inactive regulatory protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PB68_CELJU
hypothetical protein
Inactive regulatory protein {ECO:0000313|EMBL:ACE84517.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japo
BD02T64_scaffold_3787_6
unknown

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comp(6686..6955)
DNA (270bp) protein (90aa)

This feature has no annotations

BD02T64_scaffold_3787_7
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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7065..7949
DNA (885bp) protein (295aa)
Uncharacterized protein YcbX n=2 Tax=sulfur-oxidizing symbionts RepID=G2FH72_9GAMM
Uncharacterized protein YcbX {ECO:0000313|EMBL:EGW53886.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichona
Fe-S domain protein
BD02T64_scaffold_3787_8
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8050..8652)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N4S8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAT13350.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubri.;"
hypothetical protein
BD02T64_scaffold_3787_9
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8938..9657
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WZ79_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI25124.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
BD02T64_scaffold_3787_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9743..10183)
DNA (441bp) protein (147aa)
Universal stress protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ73_9GAMM
uspA; universal stress protein UspA
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3787_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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10337..10834
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ74_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44866.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3787_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10858..11682)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ75_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44867.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3787_13
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12047..13021
DNA (975bp) protein (325aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1232683 species="Bacteria; Proteobac
topoisomerase I n=1 Tax=Marinobacterium stanieri RepID=UPI000255848E
topA; DNA topoisomerase I
BD02T64_scaffold_3787_14
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12966..14672
DNA (1707bp) protein (569aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=937772 species="Bacteria; Proteobact
DNA topoisomerase 1 n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LFW1_9GAMM
topA; DNA topoisomerase I
BD02T64_scaffold_3787_15
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14784..16832)
DNA (2049bp) protein (683aa)
Methyl-accepting chemotaxis protein n=1 Tax=Bermanella marisrubri RepID=Q1MZR3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGK42006.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
chemotaxis protein
BD02T64_scaffold_3787_16
unknown

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comp(16786..16977)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 16 items

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