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BD02T64_scaffold_229

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Displaying items 1-30 of 91 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_229_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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1..648
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RV66_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35145.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
BD02T64_scaffold_229_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(664..1944)
DNA (1281bp) protein (427aa)
Thiolase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPP9_9GAMM
thiolase
Thiolase {ECO:0000313|EMBL:CBL46791.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2255..3676
DNA (1422bp) protein (474aa)
Short-chain dehydrogenase/reductase SDR superfamily n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPP8_9GAMM
fabG2; short-chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR superfamily {ECO:0000313|EMBL:CBL46790.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3784..4785)
DNA (1002bp) protein (334aa)
Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPP5_9GAMM
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL46787.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5077..5934
DNA (858bp) protein (286aa)
MaoC-like protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPP4_9GAMM rbh
MaoC-like protein
MaoC-like protein {ECO:0000313|EMBL:CBL46786.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6036..6851
DNA (816bp) protein (272aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=83406 species="Bacteria; Proteo
Glutamate racemase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPP3_9GAMM rbh
BD02T64_scaffold_229_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6995..8554
DNA (1560bp) protein (520aa)
Predicted response regulator receiver n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJP2_9GAMM
response regulator receiver
Predicted response regulator receiver {ECO:0000313|EMBL:CBL45034.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_8
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8567..9631)
DNA (1065bp) protein (355aa)
Rhodopsin-like GPCR superfamily protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YLY4_OLEAN
Rhodopsin-like GPCR superfamily protein {ECO:0000313|EMBL:CCK75777.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica
SAM-dependent methyltransferase
BD02T64_scaffold_229_9
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9746..10108)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KLM5_SHEWM
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACA87322.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanell
BD02T64_scaffold_229_10
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..11385)
DNA (1134bp) protein (378aa)
OmpA/MotB n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21N79_SACD2
OmpA/MotB
OmpA/MotB {ECO:0000313|EMBL:ABD79850.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (str
BD02T64_scaffold_229_11
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11492..12448)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G6U0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERP92341.1}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
lipolytic protein
BD02T64_scaffold_229_12
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12594..14531)
DNA (1938bp) protein (646aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source=
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI00036BF6B2
integral membrane sensor hybrid histidine kinase
BD02T64_scaffold_229_13
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14694..15743
DNA (1050bp) protein (350aa)
Medium-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCK75107.1}; EC=6.2.1.- {ECO:0000313|EMBL:CCK75107.1};; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Ol
Medium-chain-fatty-acid--CoA ligase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YKT2_OLEAN
AMP-dependent synthetase/ligase
BD02T64_scaffold_229_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15757..16299
DNA (543bp) protein (181aa)
AMP-dependent synthetase/ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
long-chain fatty acid--CoA ligase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B559DE
AMP-dependent synthetase/ligase
BD02T64_scaffold_229_15
unknown

Not on your lists

16296..16556
DNA (261bp) protein (87aa)

This feature has no annotations

BD02T64_scaffold_229_16
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16621..18096
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG48_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW30298.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_229_17
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18116..19132)
DNA (1017bp) protein (339aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JS07_9GAMM
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EDY87351.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
AraC family transcriptional regulator
BD02T64_scaffold_229_18
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19166..19519)
DNA (354bp) protein (118aa)
HopJ type III effector protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T3E8_META2 rbh
HopJ type III effector protein
HopJ type III effector protein {ECO:0000313|EMBL:CCE23670.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methy
BD02T64_scaffold_229_19
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19516..20313)
DNA (798bp) protein (266aa)
UPF0246 protein RED65_01030 n=1 Tax=Bermanella marisrubri RepID=Q1N4X8_9GAMM
UPF0246 protein RED65_01030 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubri.;"
hypothetical protein
BD02T64_scaffold_229_20
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20546..21325
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037212FC
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFY33682.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
BD02T64_scaffold_229_21
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21363..22412)
DNA (1050bp) protein (350aa)
Diguanylate cyclase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6ABF2_PSEF1 rbh
cyclic nucleotide-binding protein Tax=GWA2_Rhodocyclales_65_20_curated
diguanylate cyclase
BD02T64_scaffold_229_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22659..24152)
DNA (1494bp) protein (498aa)
Histidine kinase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJJ5_9GAMM
histidine kinase
Histidine kinase {ECO:0000313|EMBL:CBL44987.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_23
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24265..25740)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000381C021
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADP87612.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfov
BD02T64_scaffold_229_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25937..26794
DNA (858bp) protein (286aa)
Predicted beta-lactamase family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJJ3_9GAMM
beta-lactamase
Predicted beta-lactamase family protein {ECO:0000313|EMBL:CBL44985.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_25
unknown

Not on your lists

comp(26768..26989)
DNA (222bp) protein (74aa)

This feature has no annotations

BD02T64_scaffold_229_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27194..28597
DNA (1404bp) protein (468aa)
Predicted ABC1 family protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJI6_9GAMM
ABC1 family protein
Predicted ABC1 family protein {ECO:0000313|EMBL:CBL44978.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_27
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28752..30002
DNA (1251bp) protein (417aa)
Predicted signal transduction protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SA21_HAHCH
signal transduction protein
Predicted signal transduction protein {ECO:0000313|EMBL:ABC32503.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella che
BD02T64_scaffold_229_28
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30042..31607)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJI1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44973.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_229_29
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31887..33086)
DNA (1200bp) protein (400aa)
Major facilitator transporter id=4714175 bin=GWC2_Pelobacter_58_13 species=Alteromonas sp. genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
major facilitator transporter Tax=GWC2_Pelobacteraceae_58_13_curated
major facilitator superfamily protein
BD02T64_scaffold_229_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33251..34855
DNA (1605bp) protein (535aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Predicted esterase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJH4_9GAMM
esterase
Displaying items 1-30 of 91 in total

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