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BD02T64_scaffold_4320

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4320_1
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1652)
DNA (1650bp) protein (550aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQG7_NEPCE
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1545442 species="Bacte
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
BD02T64_scaffold_4320_2
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1834..3297)
DNA (1464bp) protein (488aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
tRNA modification GTPase MnmE n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQG5_NEPCE
tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
BD02T64_scaffold_4320_3

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comp(3367..5073)
DNA (1707bp) protein (569aa)
insertase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A4D221 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO06610.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
yidC; Preprotein translocase subunit
BD02T64_scaffold_4320_4
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5404..5784)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00035DE0C5
ribonuclease P
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
BD02T64_scaffold_4320_5
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5803..5937)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L0U8_9GAMM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma
50S ribosomal protein L34
BD02T64_scaffold_4320_6
unknown

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6316..6576
DNA (261bp) protein (87aa)

This feature has no annotations

BD02T64_scaffold_4320_7
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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6801..8252
DNA (1452bp) protein (484aa)
chromosomal replication initiation protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000303E047 rbh
dnaA; chromosomal replication initiator protein DnaA Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
chromosomal replication initiator protein DnaA
BD02T64_scaffold_4320_8
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8295..9401
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=305900 species="Bacter
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Endozoicomonas elysicola RepID=UPI00037AB6AA
BD02T64_scaffold_4320_9
Idiomarina loihiensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9352..10521
DNA (1170bp) protein (390aa)
DNA replication and repair protein RecF n=1 Tax=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) RepID=RECF_IDILO
recF; recombinational DNA repair ATPase
DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365}; TaxID=283942 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="I
Displaying 9 items

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