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BD02T64_scaffold_1060

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1060_1
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43..561
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HHU0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD47909.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
BD02T64_scaffold_1060_2
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

558..1064
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP56_9GAMM
biopolymer transport protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
hypothetical protein
BD02T64_scaffold_1060_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1061..1978
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP55_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46597.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1060_4
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1989..2561
DNA (573bp) protein (191aa)
Redoxin domain protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QP41_GLANF
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:AEP31749.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitratir
BD02T64_scaffold_1060_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2611..3552
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP53_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46595.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1060_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3552..5705
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP52_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46594.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1060_7
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6229
DNA (456bp) protein (152aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Grimontia sp. AK16 RepID=R1H034_9GAMM
BD02T64_scaffold_1060_8
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6226..8772)
DNA (2547bp) protein (849aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Pseudomonas sp. GM74 RepID=J3BJ96_9PSED
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJM86538.1}; Flags: Precursor;; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomon
hypothetical protein
BD02T64_scaffold_1060_9
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8886..10139)
DNA (1254bp) protein (418aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S9K6_HAHCH rbh
response regulator rbh
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:ABC32668.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahe
BD02T64_scaffold_1060_10
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10247..10786)
DNA (540bp) protein (180aa)
Glycogen debranching enzyme GlgX n=2 Tax=sulfur-oxidizing symbionts RepID=G2DA09_9GAMM rbh
Uncharacterized protein YaiL {ECO:0000313|EMBL:EGW55486.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichona
nucleoprotein/polynucleotide-associated enzyme
BD02T64_scaffold_1060_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10818..11954)
DNA (1137bp) protein (379aa)
FAD-dependent oxidoreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWE5_9RHIZ
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AIB14611.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
BD02T64_scaffold_1060_12
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12363..12671
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000360978B
Uncharacterized protein {ECO:0000313|EMBL:ERG44739.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
BD02T64_scaffold_1060_13
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12843..13472
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036EEA9F
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:ERP87576.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia
flavin-nucleotide-binding protein
BD02T64_scaffold_1060_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13621..15387)
DNA (1767bp) protein (589aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJV1_9GAMM
Membrane protein involved in aromatic hydrocarbon degradation
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:CBL45093.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1060_15
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15731..16774
DNA (1044bp) protein (348aa)
Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU19_9GAMM
AraC family transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
helix-turn-helix domain protein
BD02T64_scaffold_1060_16
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16845..17450)
DNA (606bp) protein (202aa)
sulfite oxidase cytochrome subunit Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
cytochrome C, class I id=12550295 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
putative cytochrome c, class 1
BD02T64_scaffold_1060_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17443..18747)
DNA (1305bp) protein (435aa)
soxC; sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1N3_9BURK
oxidoreductase molybdopterin binding protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
BD02T64_scaffold_1060_18

Not on your lists

comp(18856..19179)
DNA (324bp) protein (108aa)
ArsR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023782D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO00440.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
regulatory protein ArsR
BD02T64_scaffold_1060_19
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19306..21549)
DNA (2244bp) protein (748aa)
Cation transport ATPase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TWV9_9GAMM
Cation transport ATPase
Cation transport ATPase {ECO:0000313|EMBL:AGS39650.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_1060_20
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21656..22249)
DNA (594bp) protein (198aa)
Putative copper-binding protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TFR5_9GAMM
putative copper-binding protein
Putative copper-binding protein {ECO:0000313|EMBL:AGS39692.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclo
BD02T64_scaffold_1060_21
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22284..25424)
DNA (3141bp) protein (1047aa)
Putative silver efflux pump n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TXD1_9GAMM
Putative silver efflux pump
Putative silver efflux pump {ECO:0000313|EMBL:AGS39653.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclas
BD02T64_scaffold_1060_22
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25414..26946)
DNA (1533bp) protein (511aa)
Membrane-fusion protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T7S9_9GAMM
Membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:AGS39654.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_1060_23
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26994..28415)
DNA (1422bp) protein (474aa)
Putative cation efflux protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TWW6_9GAMM
Putative cation efflux protein
Putative cation efflux protein {ECO:0000313|EMBL:AGS39655.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloc
BD02T64_scaffold_1060_24
unknown

Not on your lists

comp(28547..28918)
DNA (372bp) protein (124aa)

This feature has no annotations

BD02T64_scaffold_1060_25
unknown

Not on your lists

29241..30320
DNA (1080bp) protein (360aa)

This feature has no annotations

BD02T64_scaffold_1060_26
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30328..31323)
DNA (996bp) protein (332aa)
Thiamine biosynthesis lipoprotein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6Z1U9_9ALTE
Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:GAC30191.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glacieco
ApbE family lipoprotein
BD02T64_scaffold_1060_27
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31436..33004)
DNA (1569bp) protein (523aa)
4-hydroxyacetophenone monooxygenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HLN2_9GAMM rbh
4-hydroxyacetophenone monooxygenase {ECO:0000313|EMBL:ERS10180.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alc
monooxygenase, flavin-binding family
BD02T64_scaffold_1060_28
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33177..34187
DNA (1011bp) protein (337aa)
AraC family transcriptional regulator n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HNT9_9GAMM rbh
araC family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
araC family transcriptional regulator
BD02T64_scaffold_1060_29

Not on your lists

comp(34169..34681)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003675957 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN36365.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1060_30
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34966..35241
DNA (276bp) protein (92aa)
Phytoene dehydrogenase and related protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YT58_OLEAN
Phytoene dehydrogenase and related protein {ECO:0000313|EMBL:CCK76733.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarct
phytoene dehydrogenase-like protein
Displaying items 1-30 of 32 in total

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