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BD02T64_scaffold_1124

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1124_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

383..1141
DNA (759bp) protein (253aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=83406 species="Bacteria; Proteobacteria; Gammapro
Peptidyl-prolyl cis-trans isomerase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQT0_9GAMM
FKBP-type peptidylprolyl isomerase
BD02T64_scaffold_1124_2
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1199..2158)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XH58_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO81046.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
WD40 repeat-containing protein
BD02T64_scaffold_1124_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2254..2730)
DNA (477bp) protein (159aa)
Regulator of sigma D n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS9_9GAMM
Regulator of sigma D
Regulator of sigma D {ECO:0000313|EMBL:CBL47171.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1124_4
unknown

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2785..2964
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_1124_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3063..3557)
DNA (495bp) protein (165aa)
Disulfide bond formation protein B n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS8_9GAMM
dsbB; Disulfide bond formation protein
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;"
BD02T64_scaffold_1124_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3779..3997)
DNA (219bp) protein (73aa)
Ribosome modulation factor-related protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQS7_9GAMM
ribosome modulation factor-related protein
Ribosome modulation factor-related protein {ECO:0000313|EMBL:CBL47169.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1124_7
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4228..5826)
DNA (1599bp) protein (533aa)
gshA; glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_00578}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_00578};; Gamma-ECS {ECO:0000255|HAMAP-Rule:MF_00578}; Short=GCS {ECO:0000255|HAMAP-Rule:MF_00578};;
Glutamate--cysteine ligase n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=GSH1_ALCBS
BD02T64_scaffold_1124_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6101..8452)
DNA (2352bp) protein (784aa)
Predicted transcriptional accessory protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX2_9GAMM
transcriptional accessory protein
Predicted transcriptional accessory protein {ECO:0000313|EMBL:CBL43714.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1124_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8624..10867)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VBP1_PSEA7
thymidine phosphorylase
Thymidine phosphorylase {ECO:0000313|EMBL:AHL76849.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
BD02T64_scaffold_1124_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..13244)
DNA (2202bp) protein (734aa)
Protein containing DUF1631 n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PQH4_MARAH
hypothetical protein
Thymidine phosphorylase {ECO:0000313|EMBL:AHY41488.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
BD02T64_scaffold_1124_11
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13385..16492)
DNA (3108bp) protein (1036aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000362D8C9
Acriflavin resistance protein {ECO:0000313|EMBL:EAR59786.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariens
cation multi-drug efflux protein rbh
BD02T64_scaffold_1124_12
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16489..17805)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000380ED8E
Secretion protein HlyD {ECO:0000313|EMBL:EAR59787.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
RND family efflux transporter MFP subunit
BD02T64_scaffold_1124_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18119..18868
DNA (750bp) protein (250aa)
Two-component transcriptional regulatory protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX3_9GAMM
ompR; two-component transcriptional regulatory protein
Two-component transcriptional regulatory protein {ECO:0000313|EMBL:CBL43715.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1124_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19015..20352
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1
Sensory histidine kinase in two-component regulatory system with OmpR n=1 Tax=gamma proteobacterium HdN1 RepID=E1VFX4_9GAMM
envZ; Sensory histidine kinase in two-component regulatory system with OmpR
BD02T64_scaffold_1124_15
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20491..21480
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVB8_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEE43680.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia a
BD02T64_scaffold_1124_16
unknown

Not on your lists

21685..22164
DNA (480bp) protein (160aa)

This feature has no annotations

BD02T64_scaffold_1124_17
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22250..23581
DNA (1332bp) protein (444aa)
Leucine-rich protein n=1 Tax=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) RepID=Q7MTS7_PORGI rbh
leucine-rich protein
Leucine-rich protein {ECO:0000313|EMBL:AAQ66853.1}; TaxID=242619 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis (st
BD02T64_scaffold_1124_18
unknown

Not on your lists

23691..27548
DNA (3858bp) protein (1286aa)

This feature has no annotations

BD02T64_scaffold_1124_19
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

28206..29237
DNA (1032bp) protein (344aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
BD02T64_scaffold_1124_20
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29577..29921)
DNA (345bp) protein (115aa)
LuxR family transcriptional regulator n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I0E1_9GAMM
LuxR family transcriptional regulator {ECO:0000313|EMBL:ERS14164.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="A
LuxR family transcriptional regulator
BD02T64_scaffold_1124_21
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30109..33651)
DNA (3543bp) protein (1181aa)
Rhs element Vgr protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GPN7_PSEST
Rhs element Vgr protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Rhs element Vgr protein
BD02T64_scaffold_1124_22
unknown

Not on your lists

33714..33887
DNA (174bp) protein (58aa)

This feature has no annotations

BD02T64_scaffold_1124_23
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33807..34472)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC42790.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
BD02T64_scaffold_1124_24
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(34550..35158)
DNA (609bp) protein (203aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3VVH3_9LEPT rbh
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EPG68039.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar K
putative transcriptional regulator, Crp/Fnr family
BD02T64_scaffold_1124_25
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35178..36374)
DNA (1197bp) protein (399aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rR
Ribosomal RNA large subunit methyltransferase G n=1 Tax=Osedax symbiont Rs2 RepID=S6I0B4_9GAMM
hypothetical protein
BD02T64_scaffold_1124_26
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36483..38027)
DNA (1545bp) protein (515aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WD86_9GAMM
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
BD02T64_scaffold_1124_27
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38521..39420)
DNA (900bp) protein (300aa)
33 kDa chaperonin n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKZ0_9GAMM
hslO; Chaperone, heat shock 33 family protein
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=83406 species="Bacteria; Proteobacteria; Gamm
BD02T64_scaffold_1124_28
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39423..39875)
DNA (453bp) protein (151aa)
ribosome-associated heat shock protein Hsp15 n=1 Tax=Vibrio campbellii RepID=UPI00026C50CC
heat shock protein
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=338187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain ATCC
BD02T64_scaffold_1124_29
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39906..40577)
DNA (672bp) protein (224aa)
haloacid dehalogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C63D0
Haloacid dehalogenase {ECO:0000313|EMBL:KJK09453.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;
HAD family hydrolase
BD02T64_scaffold_1124_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40673..41251
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKZ3_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45485.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 1-30 of 54 in total

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