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BD02T64_scaffold_1174

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1174_1
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11..553)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DU63_PSEMN
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
hypothetical protein
BD02T64_scaffold_1174_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(884..1690)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQD6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47028.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1174_3
Acinetobacter sp. NIPH 809, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1995..3521
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 809 RepID=N8QPK2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENU23224.1}; TaxID=1217713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
hypothetical protein
BD02T64_scaffold_1174_4
unknown

Not on your lists

3629..4246
DNA (618bp) protein (206aa)

This feature has no annotations

BD02T64_scaffold_1174_5
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4395..4664
DNA (270bp) protein (90aa)
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ53_9BACT
araC-type DNA-binding domain-containing protein
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:AJQ97223.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales;
BD02T64_scaffold_1174_6
unknown

Not on your lists

comp(4790..5233)
DNA (444bp) protein (148aa)

This feature has no annotations

BD02T64_scaffold_1174_7
unknown

Not on your lists

comp(5230..5517)
DNA (288bp) protein (96aa)

This feature has no annotations

BD02T64_scaffold_1174_8
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5962..7581
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VRP9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO12865.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
BD02T64_scaffold_1174_9
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7673..8734
DNA (1062bp) protein (354aa)
AraC family transcriptional regulator n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A3C3B
Helix-turn-helix domain protein {ECO:0000313|EMBL:KGS05988.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.
helix-turn-helix domain protein
BD02T64_scaffold_1174_10
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9023..9616
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANQ3_DESPS
Uncharacterized protein {ECO:0000313|EMBL:KKD60610.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
hypothetical protein
BD02T64_scaffold_1174_11
unknown

Not on your lists

9674..10456
DNA (783bp) protein (261aa)

This feature has no annotations

BD02T64_scaffold_1174_12
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10844..11407
DNA (564bp) protein (188aa)
PKD domain containing protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DNE4_9BACT
PKD domain containing protein {ECO:0000313|EMBL:EOZ98750.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
BD02T64_scaffold_1174_13
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11422..11811
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAD4_HALMT
Strain A contig00009, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ55496.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
hypothetical protein
BD02T64_scaffold_1174_14
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..12121)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YK68_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC17003.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_1174_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12271..15165
DNA (2895bp) protein (965aa)
PAS sensor protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI56_9GAMM
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:CBL44498.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1174_16
unknown

Not on your lists

15525..16319
DNA (795bp) protein (265aa)

This feature has no annotations

BD02T64_scaffold_1174_17
unknown

Not on your lists

16298..16978
DNA (681bp) protein (227aa)

This feature has no annotations

BD02T64_scaffold_1174_18
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..19599
DNA (2649bp) protein (883aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Putative uncharacterized protein id=14625959 bin=bin7_NC10_sister species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
BD02T64_scaffold_1174_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19753..22626)
DNA (2874bp) protein (958aa)
Sensor histidine kinase/response regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GIU1_9GAMM
sensory box histidine kinase/response regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
BD02T64_scaffold_1174_20
unknown

Not on your lists

comp(22784..22978)
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_1174_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23022..28430
DNA (5409bp) protein (1803aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00037BEAD4
Uncharacterized protein {ECO:0000313|EMBL:EDY17404.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
BD02T64_scaffold_1174_22
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

28495..30030
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) RepID=S0E6W8_GIBF5 rbh
FAD/FMN-containing dehydrogenase Tax=GWC2_Ignavibacteria_rel_36_12_curated
FAD linked oxidase domain-containing protein
BD02T64_scaffold_1174_23
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30084..30908
DNA (825bp) protein (275aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QDL0_9DELT rbh
Lipoprotein {ECO:0000313|EMBL:KFA91892.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vi
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_1174_24
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30953..31492)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VSF0_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO13095.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
BD02T64_scaffold_1174_25
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31631..33058)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Sh
Sensor histidine kinase n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CSP6_SHEPW
sensor histidine kinase
BD02T64_scaffold_1174_26
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33060..33752)
DNA (693bp) protein (231aa)
DNA-binding response regulator n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FYG1_SHESH
Chemotaxis protein CheY {ECO:0000313|EMBL:KJE44154.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
DNA-binding response regulator
BD02T64_scaffold_1174_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33967..34398)
DNA (432bp) protein (144aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZK8_COLP3
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAZ24933.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
BD02T64_scaffold_1174_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34439..35176)
DNA (738bp) protein (246aa)
Lipoprotein, putative n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CSP4_SHEPW
Uncharacterized protein {ECO:0000313|EMBL:KGJ86480.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
lipoprotein
BD02T64_scaffold_1174_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35443..36282
DNA (840bp) protein (280aa)
Hydrolase, alpha/beta fold family n=1 Tax=Moritella sp. PE36 RepID=A6F9D2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ94153.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1174_30
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36503..38905
DNA (2403bp) protein (801aa)
Peptidoglycan transglycosylase and transpeptidase PbpC n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A744_PELCD rbh
pbpC; peptidoglycan transglycosylase and transpeptidase PbpC
Peptidoglycan transglycosylase and transpeptidase PbpC {ECO:0000313|EMBL:ABA87803.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobact
Displaying items 1-30 of 79 in total

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